Corynebacterium pseudotuberculosis Cp162: CP162_05025
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Entry
CP162_05025 CDS
T02154
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
cou
Corynebacterium pseudotuberculosis Cp162
Brite
KEGG Orthology (KO) [BR:
cou00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
CP162_05025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cou03021
]
CP162_05025
Transcription machinery [BR:
cou03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CP162_05025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AFM07548
LinkDB
All DBs
Position
complement(1073712..1075322)
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AA seq
536 aa
AA seq
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MAATDNSESSATARANGTSLSGGSASEAAVPAVKKTAKKVAAKKTARKVARKAAPRKAEP
VSTTVGPVGGIEAESSTASSIEPDSVELKDSAPVKKAAKKTAKKVAKKAVKKAAKKTAKK
AAKKAPQRASKVKEPVEISPELEVTDEDDLEADDADDYDPLSDAEDDLHDEEDDLVSVLD
DGDEEDTSEESEEDEESEEDEGSSVWDEDESAALRQARKDAELTASADSVRAYLKQIGKV
ALLNAEQEVSLAKRIEAGLYATYRMEQMEEAFNNGDKEAKLTPAVKRDLRAIARDGRKAK
NHLLEANLRLVVSLAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIR
QAITRAMADQARTIRIPVHMVEVINKLGRIQRELLQDLGREPTPQELAKEMDITEEKVLE
IQQYAREPISLDQTIGDEGDSQLGDFIEDSEAVIAVDAVSFTLLQDQLQDVLHTLSEREA
GVVKLRFGLTDGMPRTLDEIGQVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
gtggcagccactgataattcagaatcttccgcaacggcacgcgctaacggcactagtctc
tctggcggttctgccagtgaagcagccgtccctgccgtaaagaagacggcaaagaaagtt
gcggcaaagaagacggcccgcaaggtcgctcggaaagctgctccgcgcaaagctgagccg
gtatccacaacagtgggtcccgtcggcggtattgaagctgaatcctccaccgcgtcatcc
atcgaaccggattctgtcgagttgaaggattctgctcccgtgaaaaaagcggctaagaaa
accgctaaaaaggtagccaagaaagcagtcaaaaaggcagctaaaaaaactgccaaaaaa
gcagcgaagaaagcacctcaacgtgcatccaaggtcaaagagccagtagagatttctcct
gaattggaagttaccgatgaagatgatctcgaagctgacgacgccgacgattacgatcct
ctcagtgacgcagaggatgatcttcatgatgaagaagacgacctcgtatcggtcctcgac
gatggcgatgaggaagacacctcagaggaatctgaggaagatgaggaatctgaggaagac
gaggggtcttctgtctgggacgaggatgagtccgcggcattacgccaagcacgtaaagat
gccgagcttacagcttctgcagactcggtgcgcgcttatctgaagcagatcggtaaagtt
gctctccttaatgcagagcaagaagtctccctagctaagcgtattgaggcaggtctttat
gccacttaccgcatggagcagatggaagaggcttttaacaacggcgataaggaagcaaag
ctaacgcctgcagttaaacgcgatctccgcgctatcgctcgcgatgggcgtaaggctaag
aatcatttgttagaagccaacctgcgcctcgtggtttctttagctaagcgttataccggt
cgcggtatggctttcttggacttaatccaagagggcaaccttggacttatccgcgcagtg
gaaaagttcgattacaccaagggatacaagttctccacgtatgctacctggtggatccga
caagccattacccgcgcaatggcggatcaagcccgaaccatccgtattcctgtccatatg
gtagaggtcatcaataagctgggtagaatccagcgtgagctgctccaggatttgggacgc
gagcccactccgcaagagctggccaaggaaatggatatcaccgaggaaaaggttctcgag
atccaacaatatgcgcgcgaaccgatctctctcgatcagactatcggcgatgaaggcgac
agtcagcttggtgactttatcgaggattccgaggcagttatcgctgttgacgcagtttcc
tttacgttgctgcaagaccagctgcaggatgttctccacaccctctcagagcgcgaagcc
ggcgtggtcaaactccgttttggcctcaccgatggcatgccccgaactctcgatgagatc
ggccaggtttatggagttacccgtgagcgtatccgccagatcgagtctaagactatgtcc
aagctacggcacccttcgcgttcccaggttctccgtgattaccttgattaa
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