Corynebacterium pseudotuberculosis Cp162: CP162_06375
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Entry
CP162_06375 CDS
T02154
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cou
Corynebacterium pseudotuberculosis Cp162
Pathway
cou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cou00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CP162_06375 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cou03400
]
CP162_06375 (uvrA)
DNA repair and recombination proteins [BR:
cou03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CP162_06375 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CP162_06375 (uvrA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
RsgA_GTPase
AAA_16
AAA_23
AAA_25
nSTAND3
AAA_22
nSTAND_NTPase5
nSTAND1
AAA_18
DnaJ_CXXCXGXG
Viral_helicase1
NACHT
MMR_HSR1
cobW
ScfRs
SLFN-g3_helicase
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AFM07289
LinkDB
All DBs
Position
complement(1377684..1380548)
Genome browser
AA seq
954 aa
AA seq
DB search
MADRLVVRGAREHNLKGVNIDIPRDSMVVFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVDFIDGLSPAVSIDQKSTNRNPRSTVGTITEIYDYLRLLFARAGTAH
CPVCDAVIERQTPQQIVDQVLAMEEGLKFQVLAPVVRTRKGEFVDLFADLASQGFSRVQV
DGEVYSLTEPPKLKKQIKHDIDVVVDRLQVKPSQRQRLTDSVETALGLADGVVALDFVSL
DSSDPHRVRRFSEKMACPNGHVLSVDELEPRSFSFNSPYGACPDCDGLGTRTVVDVDLLI
PDKDAPVVRCVQPWNSSPNHKYFQKLIEGLAAALGFDPETPFSKLTKAQQNALINGSSDE
VTVRYKNRYGRVRNWTAPFEGVLGYIERKLEQTGSESQKDRLLQYTREDACKTCGGARLR
PEILAVRIRSTSHGELSIAGLSELSVNDAAEFLKSLVLGKREEIIAGAVLKEINARLKFL
LDVGLNYLTLNRSAGTLSGGEAQRIRLATQIGSGLAGVLYVLDEPSIGLHQRDNQRLIAT
LERLRDIGNTLIVVEHDEDTIRAADWLIDVGPKAGEYGGQIVYQGKPQGIIECEESITGA
YLSGRKVLGVPDERRSIDPNRKLKVVGARENNLRDIDVEIPLGVLACITGVSGSGKSTLI
NQILAKVLGNELNRSRNVPGRAKRVEGMENLDKLVQVDQSPIGRTPRSNPATYTGVFDKI
RTLFAETSEAKVRGYKAGRFSFNVKGGRCEACQGDGTLKIEMNFLPDVYVPCEVCQGARY
NRETLEVKYKGKNIAEVLDMPISEAAEFFEPITSIHRYLKTLTEVGLGYVRLGQSATTLS
GGEAQRVKLASELQKRSNGRTIYILDEPTTGLHFEDIRKLMLVIQGLVDKGNSVIVIEHN
LDVIKAADWIIDMGPEGGSGGGTVVAEGTPEAVAAVSGSYTGAFLKEVLGKQPA
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
gtggcagatcgtcttgtagtacgtggtgcacgggaacacaacctaaaaggcgtgaatatt
gatattccgcgcgattctatggtcgtgttcacggggctatcgggatcaggaaaatcatcc
ttagcttttgacacgatttttgccgagggacaacggcgctatgttgagtctttgtcttca
tatgcccgaatgtttttagggcagatggataagccggatgtggatttcatcgatggtctt
tctcctgctgtttctattgatcagaagtccactaaccgtaatccgcgctccacggtgggc
acgattacagagatttatgattatctccgactcttgtttgctcgagctggcactgcgcat
tgtccggtctgcgatgcagtaattgagcgtcagactccacagcagatcgtcgaccaggta
ttagcaatggaagagggattaaagttccaggttctggctcctgtagtacgcactcgcaaa
ggtgaattcgttgatcttttcgcggacttagcttctcaaggtttctcacgagtgcaggtt
gatggcgaggtatattctttaacagagcctcctaagctgaagaaacaaatcaagcatgat
attgacgtggttgtggataggcttcaggtgaagccatcgcagcgacagcgtttaacagac
tctgtagagacagcattgggattagccgatggggttgttgctttggattttgtgtcctta
gattcctctgatccacatcgagttcgtcgtttctcggagaaaatggcgtgtcctaatggc
cacgtattaagtgtggatgagcttgaaccacgttctttctctttcaattctccttatggt
gcgtgccctgattgcgatggcttaggaacccgaacggtagtagacgtcgatcttctgatt
ccagataaagacgctcctgtggtgcgctgcgttcagccttggaactcgagcccaaatcat
aaatattttcaaaaacttattgaagggcttgctgcggccctggggtttgatcccgaaact
cctttcagcaagttaaccaaagctcaacaaaatgcacttattaacggtagctctgatgag
gtgactgtacgttataaaaaccgttatggccgagtgcgaaattggacagcgccttttgaa
ggcgttttggggtatatcgagagaaagttagagcaaaccggttctgaatctcagaaggat
cggctacttcagtacacccgcgaagatgcgtgtaaaacatgtggcggcgctcgcttgcgt
ccggagatcttagctgttcgtatcaggtctacctctcatggtgagctttctatcgcagga
ttgagtgagctttccgttaatgatgcggctgaattcttaaagtccttggtgctgggcaag
cgtgaagagattattgccggagctgtactgaaggaaattaatgctaggttgaaattcttg
ctagatgttgggctaaactacctcactctaaaccggagcgcaggcacattgtctggaggg
gaagcccagcgtattcgtttagctacacagattggttccgggttggctggagttctctat
gttctcgatgaaccctcgattggactgcatcaacgagataaccagcgtttgattgctacg
ctcgagcggcttcgcgatattggtaataccctcatcgttgtagagcatgatgaggacact
atccgtgcagcagattggcttatcgacgtagggccaaaggccggtgagtacggtggacaa
attgtttaccagggcaagcctcagggaatcattgagtgcgaggagtccatcactggtgca
tatctttctggtcgaaaagtcctcggagtgccggatgaacgccgaagcattgatccaaac
cgcaagctcaaagttgtgggggcgcgagaaaacaatctgagagatattgatgttgaaatc
cctttgggagtacttgcctgtattacgggagtatcgggctcgggtaaatcaacgttaatc
aatcagattcttgcaaaggtcttaggcaatgagctgaatagatcgcgaaatgtcccgggg
agggcaaaacgcgttgaagggatggagaacctagataaattagtgcaggttgatcaatct
cccatcgggcgcacgcctcgttccaatcctgcaacgtatacaggggtctttgataaaatt
agaaccttgttcgcggagacctctgaagccaaagttcgaggctataaagccggccgtttc
tctttcaacgttaaaggcgggaggtgcgaagcgtgccagggcgacggaactttgaagatt
gagatgaatttcttgcctgatgtctatgttccgtgtgaggtttgtcagggcgctcgctac
aatcgtgagactttggaagttaagtacaagggaaaaaatatcgccgaagtccttgatatg
ccgataagtgaggccgctgaattctttgagccaatcacttcgattcaccgttaccttaaa
actttgacagaagtgggtttggggtacgtcagattagggcagtcagcgaccacactttct
ggaggtgaagcacaacgcgtaaaacttgcctcagagttgcagaaacgctccaacgggaga
actatttatattttggatgagccgacaacagggcttcattttgaagatattagaaagctc
atgcttgttatccagggattagtggataaaggaaattcggtcatagtaatcgagcataat
ttggatgtaataaaggctgctgactggattatcgatatgggcccagaaggaggatctggc
ggaggtactgtggtcgcagaaggaaccccggaagccgttgcggccgtttcaggttcttac
actggagcttttttaaaggaagtcttaggtaagcaaccggcctag
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