Corynebacterium pseudotuberculosis Cp162: CP162_07395
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Entry
CP162_07395 CDS
T02154
Name
(GenBank) helicase
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
cou
Corynebacterium pseudotuberculosis Cp162
Pathway
cou03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cou00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CP162_07395
09124 Replication and repair
03420 Nucleotide excision repair
CP162_07395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cou03021
]
CP162_07395
03400 DNA repair and recombination proteins [BR:
cou03400
]
CP162_07395
Enzymes [BR:
cou01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CP162_07395
Transcription machinery [BR:
cou03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CP162_07395
DNA repair and recombination proteins [BR:
cou03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CP162_07395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AFM06949
LinkDB
All DBs
Position
1607709..1609358
Genome browser
AA seq
549 aa
AA seq
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MAFGDGPLIVQSDKTVLLEIDHPQADTARAALAPFAELERAPEHIHTYRITPLALWNARA
AGHDAEGIVDVLETFSRFPVPQALLIDVAETMSRYGRVRLHKHPAHGLILESAEPAILAE
LIRHKKIRPMLGAQIDEETIVVHPSERGRLKQELLKVGWPAEDLAGYVDGEAHPIALSQE
HEHWELRDYQRMAADSFWEGGSGVVVLPCGAGKTMVGAASMARAQATTLILVTNTVAGRQ
WRDELLRRTTLTPEEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRALELFDSRDWGLII
YDEVHLLPAPVFRMTSDLQSRRRLGLTAKLVREDGREGDVFSLIGPKRYDAPWKDLEQRG
FIATAECTEVRTTMTHEERMLYATAENQDRYRIAACAESKLRAVDTLLHRHQGLPTLIIG
AYIDQLEELGARFDAPVIEGKTSNKKREELFNKFRAGHITTLVVSKVANFSIDLPEAAVA
IQVSGTFGSRQEEAQRLGRLLRPKADGSEAHFYSVVSRDSLDSEYAAHRQRFLAEQGYAY
RIVDAADLG
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
gtggcatttggtgacggaccgctgatcgttcagtcggataaaaccgttttgttagaaatc
gatcacccccaagcagacacagcacgagcggcgctagcgccctttgcggagcttgaacgt
gcaccagagcacattcatacgtatcggatcactcctttagctttatggaatgcacgcgct
gcaggccacgatgcagaaggcattgttgatgtattagagactttctcgcgttttcccgtt
ccccaggctttgcttatcgacgtcgcagagaccatgtctaggtacggtcgagtgcgcctg
cacaagcatcctgcacatggtctcattcttgagtccgcagaaccggcgattctcgccgag
ctgatacgccataagaaaattcgtcccatgctaggcgcacaaatcgacgaggaaacaatc
gttgtgcacccttcagaaagagggcgtctcaagcaagagcttctcaaggttggctggccg
gccgaagaccttgccggctatgtggatggcgaggctcaccctattgcgttgtctcaagaa
catgagcattgggagctccgcgactatcaaaggatggcggcggattctttttgggaggga
ggaagcggcgtggttgttctcccctgcggagctggaaaaaccatggtgggagccgcttct
atggcccgggcgcaagctaccacccttattttggttactaacacagtagccggacgacaa
tggcgcgatgagctactgcgacgcacaacgctaacgccagaagagatcggcgagtattcc
ggggagaaaaaggagattcgaccggttactatcgcaacgtatcaagtggtcacacgcaaa
acaaaaggagaatatcgagctcttgagctctttgattctcgcgactggggactcattatt
tatgatgaagtccacctgcttccggcaccggtcttccggatgacctcagatctccagtct
cgcagacgcctagggcttactgcgaagcttgttagagaagacggtcgggaaggcgatgta
tttagtctgatcggccccaaacgctatgacgccccgtggaaggacctagagcaacgcgga
tttatcgctaccgcggaatgcactgaagtccgcaccaccatgacgcacgaagagcgcatg
ctctatgccacggcagagaaccaagatcggtaccgcattgccgcctgcgcggagtccaag
cttcgtgccgtcgatacgctattacaccgacatcaaggcttacccacgctcatcattggt
gcatacattgaccaattagaagaactcggcgcgcgctttgatgcccctgtgatcgaagga
aaaacaagtaataaaaagcgtgaggagctatttaacaaattccgcgctggccacatcacc
acgttagttgtaagcaaagtggctaacttctctatcgatttgccagaagccgccgtagct
atccaggtctcgggcacctttgggtcacggcaggaggaggcgcaaagactaggcaggcta
ttacgaccaaaggctgacggctcagaggcgcacttctatagcgttgtaagccgcgacagt
ctcgatagcgagtatgcggcacacaggcaacgattcctggccgaacagggctatgcatac
cggattgttgacgcagccgacctaggctag
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