Colwellia sp. Arc7-635: EKO29_00075
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Entry
EKO29_00075 CDS
T06022
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cov03009
]
EKO29_00075 (rsmB)
Enzymes [BR:
cov01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
EKO29_00075 (rsmB)
Ribosome biogenesis [BR:
cov03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EKO29_00075 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NusB
RsmF-B_ferredox
Methyltransf_31
Methyltransf_25
FtsJ
MTS
Cons_hypoth95
Methyltransf_23
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
AZQ82610
LinkDB
All DBs
Position
complement(18762..20075)
Genome browser
AA seq
437 aa
AA seq
DB search
MAANLRALAARCTFAVVDKGRSLSDELPQQIAKIDIKDKGLLQELCYGVLRHLPELEYDV
RDFIKKPFTGKQRVGHFLLLVGIYQIKYTRIPDHAAFNETVSACKPLKCDHLKGVINGVL
RNFQRQQSQLIKDETQADISKLPAAVAFNHPSWFIKKLQGAYPESWQDILNANMHRPPMW
IRVNALHHSLDEYLSLLAEAKIEHSLIDEKSSAIRLTEAVDVNKLPGFALGWASVQDGAA
QQAAYLLDCQPGDNVLDCCAAPGGKTCHILEHSPKINAMTAIDIEAARLERVQENLQRLN
LQAKVIAGDALTPETWWDGQLYDRILLDAPCSATGVIRRHPDIKWLRKNEDITVLTELQQ
DIMKNIWSLLKPGGTLLYATCSVLPEENSEQVQRFLHDNSDAEHIAITDNTNDIGWQILP
NDNSMDGFYYAKIIKKS
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggccgctaatctcagagcactggctgctcgttgtacctttgccgttgttgataaaggc
cgtagtttgtcagacgaattaccacaacaaatagcaaaaattgatataaaagataaaggt
ctcctacaagaactttgttatggcgtgcttaggcatttacctgagctagaatatgacgtt
cgtgactttattaaaaaaccttttaccggtaaacaacgtgtaggtcatttcttgttactg
gtcggtatttatcaaattaaatatactcgtatacctgatcatgctgcatttaatgagacg
gtttcagcatgtaaacctttaaagtgtgaccatttaaaaggtgtgatcaacggggtacta
agaaattttcaacgtcagcaaagccagttaattaaagatgaaacgcaagccgatatcagc
aaactacccgctgctgttgcatttaatcatccatcttggtttattaaaaagctacagggt
gcttaccctgaaagttggcaagatattctgaatgctaatatgcacaggccaccaatgtgg
ataagagttaatgcgctgcaccatagccttgatgaatacttatcactgttagccgaagca
aagattgaacattcattgatcgatgaaaaatcatcagctattcgtttaacggaagccgta
gatgtaaacaagttacctggttttgcgcttggttgggcatcagtacaagatggtgcagct
caacaagcggcatacctgcttgattgtcagccaggtgataatgttcttgattgctgtgcg
gcacccggcggaaaaacctgtcatattctcgaacacagtccgaaaattaatgccatgaca
gccattgatattgaagcggcgagattagaacgcgtacaagagaatttacagcgtctaaac
ttacaagccaaagttattgctggtgacgcattaacacctgaaacgtggtgggacggacaa
ctttacgaccgtattttacttgatgctccttgttcagctaccggcgtaatacgtcgtcac
cctgatattaaatggttacgtaaaaacgaagacattacggtattaactgaattacaacaa
gatattatgaaaaacatatggtctttgttgaaacccggtggtactttgctgtatgcgaca
tgtagcgtattacctgaagaaaatagcgaacaagtacaacgttttcttcatgataattca
gatgctgaacatatcgcaataacagacaacactaatgatattggttggcagatcctaccc
aacgataattcaatggacggtttttactacgcgaaaataattaaaaaatcatag
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