Colwellia sp. Arc7-635: EKO29_00550
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Entry
EKO29_00550 CDS
T06022
Name
(GenBank) sugar ABC transporter substrate-binding protein
KO
K10439
ribose transport system substrate-binding protein
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov02010
ABC transporters
cov02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
EKO29_00550
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
EKO29_00550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cov02000
]
EKO29_00550
Transporters [BR:
cov02000
]
ABC transporters, prokaryotic type
Saccharide, polyol, and lipid transporters
Ribose transporter
EKO29_00550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_4
DRTGG
Bmp
Motif
Other DBs
NCBI-ProteinID:
AZQ86155
LinkDB
All DBs
Position
complement(143828..144835)
Genome browser
AA seq
335 aa
AA seq
DB search
MKQKDYRPYKQYYFSFISFLCVFSSNAFAEIVIGVVGKTKNDSFYQQSFKGCLKFSETHQ
NIRCVYDGADNYQDIRAQNIIVNELLEKGIDGLLISITDSDFLTNAALQTLKNKNIPVIT
FDSDLLPQHQQYRLTYVGTENFNFGKALGNHIKKFAKKENNYLCMQSGHATAPNLNKRIA
GVRYALSGQSTEQLSGQNGWFETERCPLYSLGKRDIALNQLKFMIDRDNPPVFLAVAGFA
QFNTNYIEHMKAYKTRIANGEVVIVSADTEHSQIAALKAGVSVTNLGQKPFEMGRLGTEL
LYNFITEQQKPAKSAYYLGYHYCTQANADSCTVNY
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
ataaagcagaaagattataggccttataaacaatattatttttcatttattagcttttta
tgcgtattttctagcaacgcttttgccgaaatagttattggtgttgttggaaaaactaaa
aatgatagtttttatcagcaatcttttaaaggttgcttaaaattttctgaaactcaccaa
aatatacgctgtgtctatgatggtgctgataattatcaggatattcgtgcacaaaatatt
attgtaaatgaattacttgaaaaaggtattgatggtttacttatatcaataacagattca
gattttttaaccaatgcagcgttacaaaccctcaaaaataaaaatatacctgtcatcacc
tttgattcagaccttctacctcaacatcaacaataccgtttaacttatgttggtacagaa
aattttaattttggtaaagccttaggaaatcacatcaaaaagtttgccaaaaaagaaaat
aattatctttgcatgcaatcgggtcatgcgaccgcgcctaacttgaacaaacgtatagca
ggagttcgttacgcactttctggacagagcactgagcaactatccggtcaaaatggctgg
ttcgaaacagaacgctgcccgctatatagcctaggaaaaagagacattgcattaaatcaa
ttgaaattcatgattgatagagataacccaccagtatttttggccgttgcagggttcgca
caatttaataccaattatatcgagcacatgaaagcttataaaacacgtattgctaacggt
gaagttgtgattgtttctgcggacactgaacactcacaaatagcggcacttaaagccggc
gtttctgtaactaatttggggcaaaaaccttttgaaatgggacgtttaggcactgagctt
ttatacaattttattactgagcaacaaaaaccagctaaatcagcatactacttaggttac
cattattgcacgcaagccaatgctgacagctgcacagttaattactag
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