KEGG   Colwellia sp. Arc7-635: EKO29_02650
Entry
EKO29_02650       CDS       T06022                                 
Symbol
gspD
Name
(GenBank) type II secretion system protein GspD
  KO
K02453  general secretion pathway protein D
Organism
cov  Colwellia sp. Arc7-635
Pathway
cov03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:cov00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EKO29_02650 (gspD)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:cov02044]
    EKO29_02650 (gspD)
Secretion system [BR:cov02044]
 Type II secretion system
  General secretion pathway protein
   EKO29_02650 (gspD)
SSDB
Motif
Pfam: Secretin Secretin_N type_II_gspD_N0 DUF4854
Other DBs
NCBI-ProteinID: AZQ83054
UniProt: A0A3S9Q2K7
LinkDB
Position
598296..600389
AA seq 697 aa
MRKLLSAPWYKRSLTGVVTAVLLNSVLLSTHLSAAEYSPNFKGTEIAEFINIVGKNLRKT
MIVDPNVRGKVNVRSYDLLTEKQYYQFFLNVLEVYGFSAVEMENNIVKIIRNKDAKTSSI
PVVGNENPGSGDEMVTRVVEVKNVTVRELTPLLRQLSDQAGGGNVVNYDPANVIMLTGTA
AVVNRLVQIIERVDKAGDQDVQIISLKYASAGEMVRIIEAMNKSTQGKGTGTPTFLIPKI
VADERTNSVIVSGEVKARERVARLVSRLDSELESNGNTRVYHLKYAKSEDMVKVLQGVSE
SIEADSSSASSSSKKSKTRNVSIDAHEDTNTLVITAQPDMLRSLEAVIRQLDIRRAQVLI
EAIIVEVFEGDGVNLGVQWYHESGAMSQFTNGVTPISSIAAAGEAAKTTTGDIVPAVYSS
ETGNLISAEYTKNDIEGDYSLAAQVLGSVSGTLFGIVKNDWGAIIQAVSSDTNSNLLSTP
SITTLDNEEAYFIVGQEVPIITGSATGTNNSNPFQTVERQEIGIKLKVTPQINEGSGVQL
TIEQEVSSVSGATGVDISINKREIKTTVMADDGATVILGGLIDEDVQESVQKVPLLGDIP
IIGHLFKSTSNTKRKRNLMVFLRPTIVRDGKLMNDLSKEKYNYIRALEIEKKAAGLELMS
DEKLPILPAWNDQLSLPPSFDEYMEKRAEEKSSDKSE
NT seq 2094 nt   +upstreamnt  +downstreamnt
atgcgcaaattattaagcgcaccttggtataagcgaagccttaccggggttgttactgca
gttttactcaatagtgttttgctctctactcatttgagtgccgcggaatactcacctaat
ttcaaaggtactgaaattgcggaatttattaatatagttggtaaaaatttaagaaaaacc
atgatcgttgatcccaacgtacgtggcaaagttaatgttcgtagttatgacttgttaact
gagaaacaatattaccaattcttcttaaatgttttagaagtgtatggcttttccgctgtt
gagatggaaaacaatattgttaaaattattcgtaataaagatgcaaaaacgtcttcaatt
ccagtagtgggtaatgaaaacccaggttctggtgatgaaatggtgacgcgtgttgtagaa
gttaaaaatgtgacggttcgtgaacttacgccattgctacgtcaactatcagaccaagcg
ggtggtggtaatgtagttaactacgatcccgctaacgttattatgttaaccggtacggct
gctgtggttaatcgcttagtacaaattattgagcgcgttgataaagcgggcgaccaagac
gtacaaattattagtcttaaatatgcttcggcaggtgaaatggtccgtattatcgaagcc
atgaataagtcgactcaaggtaagggtactggaactccaaccttcttaattcctaaaatt
gttgctgatgaacgtactaatagtgtaattgttagtggtgaagtgaaagctcgtgagcgt
gttgctagattagtttcacgtttagacagcgagttggaatcaaatggtaatacccgtgtt
tatcatttgaaatacgcaaaatcagaagatatggtcaaggtattacaaggtgttagtgag
tctattgaagcggattcttccagcgcaagctcatcatctaaaaagagcaaaacaagaaat
gtcagtattgatgcccatgaagataccaatacgttggttatcacggctcaacccgatatg
ttacgttcacttgaagcggttatacgccaattagatattcgtcgagcacaagtactcatt
gaagcgattatcgttgaagtatttgaaggtgacggtgttaatttaggtgtgcagtggtat
cacgagtctggtgctatgtcgcaatttaccaatggcgttacgccaataagttcgattgca
gcagcgggtgaagcagctaaaacaacaacaggcgatatagttcccgccgtatattcttcg
gaaacgggtaatttgattagtgctgaatatacaaaaaatgatatagagggcgactatagc
ttggctgctcaagtattaggttcagtaagtggcactttgtttggtattgtgaagaacgat
tggggcgcaatcattcaagccgtaagttctgatactaattccaacttactctctacacca
agtattacaacgctggacaatgaagaagcttactttattgttggtcaagaggtgcctatt
atcacgggctctgcaacgggaaccaataatagcaatccattccaaacggttgaacgtcaa
gaaattggtattaagttgaaggtaacaccacaaattaacgaaggtagtggtgtgcagtta
actatcgagcaagaagtttcttctgtaagcggcgcaaccggtgttgatatctcaattaat
aaacgtgaaattaaaaccacggtaatggcagatgatggcgcaaccgttattttaggcggt
ttgattgatgaagacgtgcaagaaagtgtacaaaaagtaccattgcttggcgatatccca
attataggtcacttatttaaatcaacgagtaacactaagcgtaagcgtaatttgatggtg
tttttacgtccgaccattgttcgtgacggcaagttgatgaatgacttgagtaaagagaaa
tacaactatattcgtgcgctagaaattgaaaagaaagcggccggtttagagttaatgtct
gatgaaaagctaccaattttgccagcatggaacgatcaattatcattaccaccatcgttt
gatgaatatatggaaaagcgtgctgaagaaaaatcatcggataaaagcgaatag

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