Colwellia sp. Arc7-635: EKO29_02945
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Entry
EKO29_02945 CDS
T06022
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00071
Fatty acid degradation
cov00280
Valine, leucine and isoleucine degradation
cov00310
Lysine degradation
cov00362
Benzoate degradation
cov00380
Tryptophan metabolism
cov00410
beta-Alanine metabolism
cov00640
Propanoate metabolism
cov00650
Butanoate metabolism
cov00907
Pinene, camphor and geraniol degradation
cov00930
Caprolactam degradation
cov01100
Metabolic pathways
cov01110
Biosynthesis of secondary metabolites
cov01120
Microbial metabolism in diverse environments
cov01200
Carbon metabolism
cov01212
Fatty acid metabolism
Module
cov_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EKO29_02945 (fadB)
00650 Butanoate metabolism
EKO29_02945 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
EKO29_02945 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
EKO29_02945 (fadB)
00310 Lysine degradation
EKO29_02945 (fadB)
00380 Tryptophan metabolism
EKO29_02945 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EKO29_02945 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
EKO29_02945 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
EKO29_02945 (fadB)
00930 Caprolactam degradation
EKO29_02945 (fadB)
Enzymes [BR:
cov01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
EKO29_02945 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
EKO29_02945 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
EKO29_02945 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
EKO29_02945 (fadB)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
ZirS_C
Motif
Other DBs
NCBI-ProteinID:
AZQ83104
UniProt:
A0A3S9Q2R1
LinkDB
All DBs
Position
663219..665381
Genome browser
AA seq
720 aa
AA seq
DB search
MLFQGKSLSAQLLDDGIVEFKFDAQGSVNKFDQATFKEYIAVVDAINNCSEAKGVLVTSG
KSSFIVGADITEFLEIFKKPEDELMPWIKQGSDVFDSFEDINLPTVVAINGFALGGGCEM
SLACDYRIADTSCSIGLPEVKLGLIPGFGGTVRLPRVIGADNAVEWMSTGKAFRAEQAMA
VGLLDAVVAPEHLREAALKMLNQAIAGKLDWRAKRQPKLEALKLSPVEAIMTFNTCKGMI
AAKAGKHYPAPMVMVKTIEAAAGLGRAGAMALENAGFAKLAKTDAATAQIGLFMADQVVK
GKAKKAGKQATKAVNKAAVLGAGIMGGGIAYQSAYKGTPIIMKDINDQALDLGLTTAAGI
LTKQVERGRMTAKKMAGVLNNITPSLSYDSVKDVDIVVEAVVENPKVKAMVLAEVESYVS
DDAIVTSNTSTISIDLLATSLKRKDKFCGMHFFNPVNKMPLVEVIRGKETSDETVAAVVA
YAAKMGKSPIVVNDCPGFYINRVLFPYFAGFSQLVLEGADFVAVDKVMEKQFGWPMGPAY
LLDVVGIDTADHCTGVMSAGFPTRMTKIDNDPVSALYNEKRLGQKNGKGFYDYGKDKRGR
PTKVAAQAAYDLFTGVDKKDFTQDETIARLMIPMVNEVVRCLEEGVVDTAAEADMGLIYG
LGFPPFRGGPIRYLETLGLDNFIAMADKYAHLGEIYQVTDGMRAMAKSGQSYFTTDVKTA
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atgttatttcaaggcaaaagcctttctgcccaattgttagatgacggcattgtcgaattt
aaattcgatgcgcaaggttcagttaacaagtttgatcaggcaacatttaaagaatatatc
gcagtagttgatgcgattaataattgcagtgaagctaaaggggtacttgttacttctggt
aagtcttctttcatcgttggtgcagatatcactgaatttttagagatatttaaaaagcct
gaagatgaactaatgccttggataaaacaaggttctgatgtttttgactcatttgaagat
attaacctaccaacagttgttgccattaatggtttcgctttaggtggcggttgtgaaatg
agcttagcttgtgattatcgtattgcagatacgtcgtgttcaatcggtttaccagaagtt
aaattgggtttaatacctggttttggtggcaccgtgcgtttaccacgtgttattggtgct
gataatgctgttgagtggatgtcgacaggtaaagcgtttagagctgaacaagcaatggct
gtaggcttacttgacgctgtagttgctccagagcatttacgtgaagcggcattaaaaatg
ttaaaccaagcgattgctggcaaattagattggcgcgcaaaacgtcaacctaaactagaa
gcattaaagctttctccagtagaagctattatgaccttcaatacctgtaaaggtatgatc
gcagctaaagcgggtaagcattaccctgcacctatggtgatggttaaaacgattgaagct
gcagcaggtttaggccgtgcaggcgcaatggctttagaaaatgcaggatttgcgaaatta
gcgaaaactgatgctgctactgcacaaattggcttgtttatggctgaccaagtagtaaaa
ggcaaggcgaaaaaagccggcaagcaagcaactaaagcggttaataaagcagctgtgttg
ggtgcaggtattatgggcggcggtattgcataccagtctgcttataaaggcacgccaatt
atcatgaaagatattaatgaccaagcacttgatttaggtcttactacggcagcgggtatt
ttaactaaacaagttgaacgtggccgcatgacagcgaaaaaaatggctggcgtgttaaat
aacatcacaccatcattaagctacgacagcgttaaagatgttgatattgttgttgaagct
gtagtagaaaatccaaaagttaaagcaatggttttagctgaagttgaaagctatgttagc
gatgacgctattgtgacttcaaacacttcaactatttcaattgatttactcgcgacaagc
ttaaagcgtaaagacaaattttgtggcatgcatttcttcaacccggtaaacaaaatgcca
ctagttgaagttattcgtggtaaagaaacttctgatgaaaccgttgctgctgttgtagcc
tatgcggcgaaaatgggtaaatcacctatcgtcgttaacgactgtcctggtttttatatc
aaccgtgttttattcccatactttgctggctttagccaattagtacttgaaggtgctgat
tttgttgctgttgataaagtcatggaaaaacaatttggttggcctatgggcccagcatac
ttacttgatgttgtgggtattgatactgctgatcattgtacgggtgttatgtctgctggt
ttcccaacacgtatgactaaaattgataatgacccagtaagtgctttatataacgaaaaa
cgtttaggtcagaaaaacggcaaaggcttctacgattacggtaaagataagcgcgggcgc
ccaacaaaagttgcagcacaagcagcttatgacttatttactggtgtagataaaaaagac
ttcactcaagacgaaactattgctcgcttgatgatccctatggtaaatgaagtggttcgt
tgtttagaagaaggtgtagttgatactgcagctgaagctgacatgggcttgatttacggt
ttaggtttccctccatttagaggtggtccaattcgttatttagaaacattaggcttagat
aactttattgcaatggcagataaatacgcgcacctaggcgaaatttatcaagttactgat
ggaatgcgcgcaatggcgaaatctggtcagtcatattttacaaccgacgttaaaacagct
tag
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