Colwellia sp. Arc7-635: EKO29_03190
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Entry
EKO29_03190 CDS
T06022
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EKO29_03190 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cov03019
]
EKO29_03190 (groL)
03110 Chaperones and folding catalysts [BR:
cov03110
]
EKO29_03190 (groL)
03029 Mitochondrial biogenesis [BR:
cov03029
]
EKO29_03190 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
cov04147
]
EKO29_03190 (groL)
Enzymes [BR:
cov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
EKO29_03190 (groL)
Messenger RNA biogenesis [BR:
cov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
EKO29_03190 (groL)
Chaperones and folding catalysts [BR:
cov03110
]
Heat shock proteins
HSP60 / Chaperonin
EKO29_03190 (groL)
Mitochondrial biogenesis [BR:
cov03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
EKO29_03190 (groL)
Exosome [BR:
cov04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
EKO29_03190 (groL)
Exosomal proteins of other body fluids (saliva and urine)
EKO29_03190 (groL)
Exosomal proteins of breast cancer cells
EKO29_03190 (groL)
Exosomal proteins of colorectal cancer cells
EKO29_03190 (groL)
Exosomal proteins of bladder cancer cells
EKO29_03190 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AZQ83148
UniProt:
A0A3Q9GAG3
LinkDB
All DBs
Position
717027..718679
Genome browser
AA seq
550 aa
AA seq
DB search
MAAKDVLFGNDARAKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGGPVITKDGVSVAKEI
ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIVNEGLKSIAAGMNPMDLKRGI
DKAVIAAVEALKGLSQECSDNKAIEQVGTISANSDETVGKIIATAMEKVGTEGVITVEEG
QALTDELDVVEGMQFDRGYLSPYFINNQESGSVELENPFILLVDKKVSNIRELLTTLEGV
AKAGKPLLIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIATLTKATV
ISEEIGMELEKASLEDLGQAKRVVISKDNTTIIDGIGEEAEIQARVAQIRGQIEDSSSDY
DKEKLQERLAKLAGGVAVIKIGAATEMEMKEKKARVEDALHATRAAVEEGVVAGGGVALV
RAADAIKDLEGINEDQTHGINVAIRAMSAPLRQIATNSGDEASVVLNEVRTGGTGNYGYN
AANSTYGDMLEMGILDPTKVTRSALQFAASVAGLMLTTEAMITDAPVKDSGGAMPDMGGM
GGMGGMGGMM
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaaaagacgtattatttggtaatgacgcacgagcaaaaatgctacgtggcgta
aatgttttagctgacgcggtaaaagtaacattaggtcctaaaggccgtaatgttgtacta
gacaaatcatttggtggtccagtgatcactaaagatggtgttagtgttgctaaagaaatc
gaattagaagacaaattcgaaaacatgggcgcacaaatggtgaaagaagttgcttctaaa
gccaacgacgaagccggtgacggtactacaacggcaactgtactagcacaagcgattgta
aacgaaggtttaaaatctattgctgcaggcatgaacccaatggaccttaaacgtggtatc
gacaaagcagttattgctgcagttgaagcacttaaaggtttgtcacaagaatgtagcgac
aacaaagccattgagcaagtaggtactatctctgctaactctgacgaaactgttggtaaa
atcattgcaacagcaatggaaaaagtaggcactgaaggtgttattactgttgaagaaggt
caagcattaacagatgagctagacgttgttgaaggtatgcagttcgaccgtggttacctt
tctccttacttcatcaacaaccaagaaagcggtagtgttgaattagaaaacccattcatt
ttattagtcgataaaaaagtatctaatatccgtgaattattaacaacattggaaggtgtt
gctaaagcgggtaagccactacttattattgctgaagatgttgaaggcgaagcgcttgca
acattagtggttaacaacatgcgtggtatcgtaaaagttgctgctgttaaagcaccaggt
tttggcgaccgtcgtaaagcaatgttacaagacatcgcgacattaactaaagcgactgtg
atttctgaagaaatcggcatggagcttgaaaaagcatcgttagaagacctaggtcaagct
aagcgtgtagttatctctaaagacaatacaacgatcatcgatggtattggcgaagaagct
gaaatccaagcacgtgttgcacaaattcgcggtcaaattgaagattcttcttctgactac
gacaaagaaaaattacaagaacgtctagctaaattagctggcggtgttgcggttatcaaa
attggtgcagcaacagaaatggaaatgaaagagaaaaaagcacgcgttgaagatgcatta
catgcaactcgcgcagcagtagaagaaggtgttgttgccggtggtggtgttgcactagta
cgtgctgctgatgcaattaaagacttagaaggcatcaacgaagaccaaactcacggtatt
aacgttgctattcgtgctatgtcagctcctttacgtcaaatcgcaactaactcaggtgac
gaagcctcagtagtgttgaacgaagtacgtactggtggtacaggtaactacggttacaat
gcagctaacagcacttacggcgatatgttagaaatgggtattcttgacccaactaaagta
acacgtagcgcattacaatttgctgcctcagttgctggcttaatgctcacaacagaagca
atgatcaccgacgcaccagtgaaagattctggtggtgctatgcctgatatgggtggcatg
ggtggtatgggcggaatgggtggaatgatgtaa
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