Colwellia sp. Arc7-635: EKO29_04040
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Entry
EKO29_04040 CDS
T06022
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cov03009
]
EKO29_04040 (dbpA)
Enzymes [BR:
cov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
EKO29_04040 (dbpA)
Ribosome biogenesis [BR:
cov03009
]
Prokaryotic type
rRNA helicases
EKO29_04040 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_30
AAA_19
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
AZQ83294
UniProt:
A0A3S9Q376
LinkDB
All DBs
Position
922659..924044
Genome browser
AA seq
461 aa
AA seq
DB search
MSDSKFSSLTLQPAILDNLASLGYHEMTEIQAKSLPAILAGQDVIGQGKTGSGKTAAFGL
GLLNKLQVKKFRIQTLVLCPTRELADQVAKEIRKLARAVHNIKVLTLCGGTPFGPQVGSL
EHGAHIIVGTPGRIEDHLGRGTLSLEHVDTLVLDEADRMLDMGFQAALDNIVDRIPQQRQ
TLLFSATFPQQIQKIANRYLQTPAVIEVEANHEDSTISQHFYRVTSDEERLTAIRLLLLT
HQPESSVIFCNTKIETQNVANKLAAYGFGVVALHGDLEQRDRDQTLVRFANKSASILVAT
DVAARGLDIEALDAVFNYDLAHDTEVHIHRIGRTGRAGSTGYAFSLFNDKDRYKIGLLED
YLERRIEGEELPNSEVLDRSIFTPKMTTIQIDGGKKQKVRPGDIVGALTSENGITFEQVG
KIQLGANWAYVAVDKSVARKALNKLTHGKLKGRTFRVKELK
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgacagcaaattttcatcacttaccttgcaacctgcaattttagacaaccttgca
tcacttggttaccatgagatgacagaaatacaagctaaaagcctacccgctattttagct
ggacaagatgttatcggccaaggtaaaactggctcaggtaaaaccgcggcatttggtctt
ggcttattgaataaactgcaagttaaaaagtttagaattcaaaccttagtactttgccca
acacgcgaattagccgatcaagtagcgaaagaaattagaaagctagcacgagcggttcat
aacattaaagtgttaacgttatgtggtggtacaccatttggtccgcaagtgggatcatta
gagcatggcgcacatattattgttggtacgccgggccgtatcgaagatcacctagggcgc
ggcacgttgtcattagagcatgttgataccttggtgttagatgaagccgatcgtatgtta
gatatgggttttcaagcggcattagataacatcgttgatagaattccgcagcaaagacaa
acattattgttcagtgccacatttcctcaacagattcaaaaaatagctaatcgctactta
caaacacccgcggtgattgaagttgaagcaaaccatgaagatagcactatttcacagcac
ttttatcgcgtaacaagtgacgaagagcgtttaacggctattcgattattactgttaacg
catcagcctgaatcgagcgtgatattttgtaatactaaaatagaaacccaaaatgtggct
aataaattggccgcttatggttttggtgttgtagcattgcatggtgatttagagcaaaga
gatagagatcaaaccttagtacgttttgcgaataaaagtgcctcaatactcgtggctact
gatgttgcagcgcgtggtttagatattgaagcgctagacgcggtatttaattatgatctt
gctcacgacactgaagtacatattcaccgtattggtcgtactggccgtgcaggtagtaca
ggttacgctttctcattatttaatgataaagaccgttataaaatcggtttgttagaagat
tatttagagcgtcgtatcgaaggtgaagaattacctaatagtgaagtattagaccgtagt
atatttacgcctaaaatgaccacgatacaaattgatggtggcaaaaagcaaaaagttaga
ccaggtgatattgttggtgcacttaccagtgaaaacggtattacatttgaacaagttggc
aaaattcaacttggcgctaactgggcatatgttgcggtagataaatcggttgcaagaaaa
gcattaaataaacttacccatggtaaattaaaagggcgtacgtttagagttaaagaactt
aaatag
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