Colwellia sp. Arc7-635: EKO29_04860
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Entry
EKO29_04860 CDS
T06022
Symbol
pspF
Name
(GenBank) phage shock protein operon transcriptional activator
KO
K03974
psp operon transcriptional activator
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cov03000
]
EKO29_04860 (pspF)
Transcription factors [BR:
cov03000
]
Prokaryotic type
Other transcription factors
Others
EKO29_04860 (pspF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
HTH_8
AAA_2
bpMoxR
AAA
AAA_16
TPR_3
Motif
Other DBs
NCBI-ProteinID:
AZQ83434
UniProt:
A0A3S9Q3L3
LinkDB
All DBs
Position
complement(1099747..1100841)
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AA seq
364 aa
AA seq
DB search
MTRFKQQDNLIGQSNNFLEVLEKISQIAPLSKPVLIIGERGTGKELVAARLHFLSKRWDQ
NYLKLNCAALNENLLESELFGYDSGAFTGASKRHEGRFERADNGTLFLDEIANTSGLIQE
KLLRVVEYGEFERVGGSRTIKTNARLVAATNEDLPSMAAAGEFRADLLDRLAFDVITLPP
LRERLDDILVLAEHFAINMARELEFELFSGFTEKAKRALLEHQWPGNIRELKNVVERSVY
RCNNPHLPVHELIIDPFESPYRPTGRIKTQDRIVTAPAAESNDNITAAPAKIEQKTQPTS
TALQFPLSLKTLSQDYEVDLIKSALASCQYNQKKTADALELTYHQLRGYLKKYNLLDSSS
ADEE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgacacgttttaagcaacaagataatctcatcggtcaatcaaacaactttttagaagtt
ttagagaaaatttctcagattgcaccgttaagtaaaccggttcttattattggtgaacgt
ggcacaggtaaagaacttgttgctgctcgtttacatttcctgtcaaaacgatgggaccaa
aattatcttaaacttaattgcgcggcgttaaatgaaaatttattagaaagcgaattattt
ggttacgacagcggcgccttcaccggtgcaagcaaacgccatgaaggtcgttttgaaaga
gccgataacggcaccttatttctagacgaaatagcgaatacctcaggtttaatccaagaa
aagttattacgtgttgtcgaatatggcgagtttgagcgtgttggtggttcaagaaccatt
aaaaccaatgcacgattagttgctgcaacaaatgaagatttaccctctatggcagcagcc
ggtgagtttcgtgctgacttactcgacagactcgcctttgatgttataacactgccacca
ctgcgagaacgtttagacgatatactagtattagctgaacactttgccattaacatggca
cgagaattagagtttgaactattcagtggttttaccgaaaaggcaaaacgtgcactactt
gaacatcaatggccgggtaatattcgagaattaaaaaatgttgtagaacgcagtgtttat
cgctgtaacaacccacatttacctgtgcatgagctgattattgacccttttgaatcaccg
taccgcccaacgggtcgtattaaaactcaagatcgcatagttactgctcctgcagccgag
agtaatgacaacataactgccgctccagcaaagattgagcaaaaaactcagcctacaagc
acagcattacaatttcctctatcattaaaaacgctatcgcaagactatgaagtcgatttg
atcaagtctgcgttggcaagttgccaatataatcaaaagaaaaccgctgacgccttagaa
ttaacctatcatcagttaagaggctacttaaaaaaatataacttactcgattcaagtagt
gcagacgaagaataa
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