Colwellia sp. Arc7-635: EKO29_05325
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Entry
EKO29_05325 CDS
T06022
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cov03032
]
EKO29_05325 (topA)
03400 DNA repair and recombination proteins [BR:
cov03400
]
EKO29_05325 (topA)
Enzymes [BR:
cov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EKO29_05325 (topA)
DNA replication proteins [BR:
cov03032
]
Prokaryotic type
DNA Topoisomerases
EKO29_05325 (topA)
DNA repair and recombination proteins [BR:
cov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EKO29_05325 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Toprim_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AZQ83513
UniProt:
A0A3S9Q3F3
LinkDB
All DBs
Position
1195064..1197745
Genome browser
AA seq
893 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPHSSTGKKVAAKSPAEVRKMAPA
AKAKYKAKRDKQALVNRMGIDPENDWEANYQILAGKEKVVAELIKLASTADTIYLATDLD
REGEAIAWHLKEIIGGDDDKYKRVVFNEITENAIQQAFSTPGELSMPGVNAQQARRFLDR
VVGFMVSPLLWKKVARGLSAGRVQSVAVKLVVEKEREIKAFDPKEFWEISADTKTASGLD
FPLDVTHENGKAFKPTNEADTNKALATLNASAYTVNKRDDKPSKSTPSAPFITSTLQQAA
STKLGFGVKRTMGLAQRLYEAGHITYMRTDSTNLGKDAVEMCRGYIADNFGENYLPEKAK
VYSSKAGAQEAHEAIRPSNVKVESAFMEGIEADAKKLYDLIWRQFVACQMTAARYTVSTI
TVGASGFDLKAKGRVMQFDGWTRVHPQLSKGDDKHLPDLSVGEVLSLEQLNPTQHFTKPP
ARFGEASLVKELEKRSIGRPSTYASIISTIQDRGYVRLESKRFYAEKMGEIVTDSLSESF
KNLMSYDFTANMEQELDEVADGKANWKDVLNGFYKNFTKQLSQADMPTEEGGMRNNEPVL
TDIDCPTCGRKMGIRTAQTGVFLGCSGYALPPKERCTTTMNLTPGEEAVSVLAEDQETEA
LRAMHRCNKCGTAMDSYLIDETRKLHVCGNNPVCDGIEVEIGEFKIKGYDGPILECDRCE
AEMELKSGRFGKYFDCTNSECKNTRKLLASGEAAPPKEDPVQLPELECEKSEAHFVLRDG
AAGIFLAANTFPRSRETRAPKVAELARFRDRISEKFYYLADAPVQDPDGNQAVVRYSRKT
KSQYVMTEVEGKATGWNAKYVDGKWVEELAKKKVVKAKPKAKAKAKPKTKKEA
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatctctggtaattgtggaatcgcctgccaaagcgaaaacaattaacaagtac
cttggtaaagattttattgttaaatcgagtgtgggtcatgtacgtgatctgccgcatagt
agcaccggtaaaaaagtagcagccaaatctccagcagaagtacgtaaaatggctcctgca
gctaaagctaaatataaagctaagcgtgataagcaagcgcttgttaatcgtatgggtatt
gatcccgagaatgattgggaagcaaattatcaaatattggcaggcaaagaaaaagttgtt
gctgaattaattaaacttgccagtactgctgacactatctatctcgcaaccgatttggat
cgcgagggtgaagcgatagcttggcatttaaaagaaattattggcggcgatgacgataaa
tataaacgtgttgttttcaatgaaataaccgaaaatgctatccaacaagccttttcgact
cctggtgaattaagtatgccaggtgtcaatgcgcaacaagcgagacgtttccttgatcgc
gtggttggctttatggttagccctttattgtggaaaaaagttgctcgtggtttatcggct
ggtcgtgttcaatctgttgctgtgaaattagtggtagaaaaagagcgtgagatcaaagct
ttcgatccgaaagaattttgggaaattagcgctgataccaaaacagcttcaggtttagat
tttccattagatgttacccatgaaaatggtaaagcatttaagccaaccaatgaagcagat
accaataaagcgttagcaacattaaatgcttcggcatataccgttaataaacgtgatgac
aaaccatctaaaagtacgccgtcagcaccttttattacttcaacactacagcaagcggca
agcacaaaactaggttttggtgttaaacgtaccatgggcttagctcagcgtttatatgaa
gcagggcatattacttatatgcgtactgactcgaccaacttaggtaaagatgccgttgaa
atgtgtcgaggttatattgctgataattttggtgaaaattatttaccagaaaaagcaaaa
gtctatagcagtaaagctggcgcgcaagaggctcatgaagctattcgaccgtcaaatgtt
aaagttgaatctgcttttatggaaggtattgaagctgatgcgaagaagctatacgacctg
atctggcgtcagtttgttgcttgtcaaatgacagcagcacgttacaccgtgagtacgata
accgttggtgcttcaggttttgatttaaaagccaaaggtcgcgttatgcagtttgatggt
tggacacgtgttcacccacaattatcaaaaggtgatgacaagcatttacctgatttatca
gttggtgaagtcttgtcacttgaacaacttaatccaacacagcattttactaagccgcca
gcgcgtttcggtgaagcatcgttggttaaagaattagaaaaacgctcaattggtcgtcct
tctacttatgcgtcaattatttcaaccattcaagatcgtggttacgtgcgcttagaaagc
aaacgcttttacgctgaaaaaatgggtgaaattgttactgacagcttatctgaaagtttt
aaaaacttaatgagctacgactttactgccaacatggagcaagagcttgatgaagtggca
gatggtaaagcaaattggaaagacgtgcttaatggcttttataaaaactttaccaagcaa
ttaagccaagctgatatgccgactgaagaaggcggcatgcgcaataacgaaccggtgtta
actgatattgactgtccaacatgtggtcgtaaaatgggcattcgtacagcgcaaactggt
gtgttcttaggttgttctggttatgccttaccacctaaagaacgttgtactactacgatg
aacttaacgccgggcgaagaagctgtaagcgtcttagctgaagatcaagaaactgaagct
ttacgcgcgatgcaccgttgtaataaatgtggcacagcgatggatagctatttaatcgat
gaaacgcgtaaattacatgtttgtggtaacaatcccgtttgtgacggtattgaagttgaa
attggtgagttcaagattaaaggctatgacggccctattctagagtgtgaccgttgtgaa
gctgaaatggagcttaaatctggccgttttggtaaatactttgattgtactaatagcgag
tgtaagaatactcgtaagctattagcaagtggtgaagctgcgccgccaaaagaagaccct
gtgcaattacctgaattagaatgtgaaaagtctgaagcacattttgttttacgtgatggt
gctgcgggtattttcttagctgcgaatacattcccaagatctcgtgaaactcgtgcccct
aaagtggctgagttagcacgctttcgcgatagaatttcagaaaaattctattaccttgct
gatgcaccagtacaagaccctgacggtaatcaagctgtcgttcgttatagccgaaaaact
aaatcacaatatgtgatgacagaagttgaaggtaaagcgacggggtggaatgctaaatat
gtcgacggtaaatgggttgaagagcttgctaagaaaaaagtagtaaaagctaagccaaag
gctaaagcaaaagctaaaccaaaaacgaaaaaagaagcataa
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