Colwellia sp. Arc7-635: EKO29_05730
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Entry
EKO29_05730 CDS
T06022
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EKO29_05730 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cov03400
]
EKO29_05730 (ruvB)
Enzymes [BR:
cov01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EKO29_05730 (ruvB)
DNA repair and recombination proteins [BR:
cov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EKO29_05730 (ruvB)
RecFOR pathway proteins
EKO29_05730 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_14
nSTAND3
AAA_16
Rad17
AAA_3
AAA_18
RNA_helicase
NTPase_1
AAA_17
ABC_tran
NB-ARC
AAA_28
TsaE
Sigma54_activ_2
AAA_19
AAA_24
TIP49
IstB_IS21
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AZQ83586
UniProt:
A0A3S9Q483
LinkDB
All DBs
Position
1299034..1300038
Genome browser
AA seq
334 aa
AA seq
DB search
MIEADRLIEPIASREDETVDRAIRPKMLSDYTGQQHVKSQMEIFIAAAIKRAEPLDHLLI
FGPPGLGKTTLANIVANEMGVSIRTTSGPVLEKAGDLAALLTNLEENDVLFIDEIHRLSP
VVEEILYPAMEDYQLDLMIGEGPAARSIKLDLPPFTLIGATTRAGALTSPLRDRFGIVQR
LEFYNTKELTEIVMRSAHFLNLEIDQEGAFEVAKRSRGTPRIANRLLRRVRDYADVKTDG
IVSKSTAASALNMLEVDNEGFDLMDRKVLEAIIDKFSGGPVGLDNIAAAIGEERETIEDV
IEPFLIQQGFLQRTPRGRIATNRAYLHFGLDFPE
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagccgaccgattaattgaacctatagctagccgtgaagatgaaacggttgat
cgcgccattaggccaaaaatgctctccgattacactgggcaacaacatgtaaagtcgcaa
atggaaatttttattgctgctgcaataaaacgagcagagccactcgatcatctattgatt
tttggtcctcctggtctaggtaaaacgaccttagctaatattgtagcgaatgaaatgggc
gttagtattcgtactacttctggtccagtattagaaaaagcgggtgatttagccgcgcta
ctaacaaaccttgaagaaaacgatgttttatttatcgatgaaatacatcgtttaagcccg
gttgttgaagagatattgtatcctgcaatggaagattatcagctagatctgatgattggt
gaaggccctgctgctcgctcaataaaactcgacttacccccttttactttgattggtgcg
acaacgcgtgccggcgctttaacatcacctctgcgagatcgttttggtattgtgcaaagg
ctagagttttataacactaaagaactgactgagattgtgatgcgttcagctcattttttg
aatctagaaatagatcaagaaggggcgtttgaagtcgcgaaacgttctcgtggcacacca
cgaatagctaatcgcttattacgtcgtgttagagattacgctgatgttaaaactgacggc
atcgtgagtaaatcaacggcagcaagtgcattaaatatgctcgaagttgataacgaaggt
ttcgatttaatggatagaaaagtgcttgaagccattattgataagtttagcggtggtcct
gtcggcttagacaatatagccgcagccataggtgaagagcgtgaaactattgaagatgtg
atcgagccctttttaatacaacagggttttttacaacgcacaccaagaggtcgaatagcc
actaatcgagcttatttacattttggcttagattttcctgaatag
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