Colwellia sp. Arc7-635: EKO29_06460
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Entry
EKO29_06460 CDS
T06022
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cov02000
]
EKO29_06460
Transporters [BR:
cov02000
]
Other transporters
Pores ion channels [TC:
1
]
EKO29_06460
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
OMP_b-brl
TSP_3
Phage_OMP
Motif
Other DBs
NCBI-ProteinID:
AZQ83701
LinkDB
All DBs
Position
complement(1483874..1484914)
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AA seq
346 aa
AA seq
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MKVFNISLLAALISAPLAAENIDKTWELGVFGDYIKSSTGKETLTEWDQMEAGKSIGIDL
QKVINDYWNVRLEIAKTRYDVGNGTDKDYGTRAGIDAIYKLEDSDLYMFAGVKRFNNVRS
YNAVNIGAGYDYQVSDRLSLYSEAAIYRDLDYGFTDQGVKLGLKYAFGDVKQAPVVAKPK
AVAAVKPVMKDSDNDGVSDAIDRCANTPSTVKVDSTGCTLYSEHEAEIKLNIAFANNSSI
VKPALVDDIQRLADFMKEYTTTSVEIEGHSSTTGAADYNLMLSKKRADAVRSILINKFNI
DESRLTSKGYGQSQLLSQENTVAAHKLNRRVVAKIATMTKEVVTKG
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtatttaacatctctctattagcagctctcatcagtgcaccactagctgcagaa
aacatcgataaaacatgggaacttggcgtattcggcgactatataaagtcaagtacgggt
aaagaaacactaacggaatgggatcaaatggaagccggtaagtctatcggtattgattta
caaaaagtaattaatgattactggaatgttcgtcttgaaattgcaaaaacacgttatgac
gtaggcaatggtacagacaaagattacggcactcgtgctggtatcgatgctatttacaaa
ttagaagatagcgacttatacatgttcgctggtgtaaaacgttttaacaatgttagaagc
tacaatgctgtaaacattggtgcgggttacgactatcaagtaagcgatcgtttgtctctt
tatagtgaagccgctatttaccgagatcttgattatggttttactgatcaaggtgtaaaa
ttaggccttaagtatgcttttggtgacgttaaacaagcaccagtagtagctaagcctaaa
gcagttgcagcagtaaaacctgtaatgaaagacagcgataacgatggtgttagtgatgct
atcgaccgttgtgcaaatacaccttcaacagtgaaagtagactctactggttgtacatta
tattcagagcatgaagctgaaattaaacttaatatcgctttcgctaataacagctctatc
gttaagccggcattagtagacgatattcaacgtttagctgatttcatgaaagagtacact
acgacttctgttgaaattgaaggccatagttcaactacgggtgctgctgactataactta
atgctttctaaaaagcgtgctgatgcggtaagaagcattcttatcaataaattcaacatt
gatgagtctcgtttaacaagtaaaggttacggccagtctcaattgttatcacaagagaat
acggttgctgctcacaagttaaaccgtcgtgttgttgctaaaatcgcaacaatgacaaaa
gaagttgttactaaaggttag
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