Colwellia sp. Arc7-635: EKO29_07705
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Entry
EKO29_07705 CDS
T06022
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cov03400
]
EKO29_07705 (sbcD)
DNA repair and recombination proteins [BR:
cov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EKO29_07705 (sbcD)
Archaeal homologous recombinant proteins
EKO29_07705 (sbcD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
mIF3
Motif
Other DBs
NCBI-ProteinID:
AZQ83915
UniProt:
A0A3Q9G7S1
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Position
1751484..1752797
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AA seq
437 aa
AA seq
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MRIIHTSDWHLGQHFYGKSRAPEHQKFLNWLIEQSQSQQIDAIIVAGDIFDTGTPPSYAR
EMYFDFIAKLHQANCQLVVLAGNHDSVAMLSESQNLLQQLSTRVISAVSDNMAEQVFVLN
SLKTEQQAVICAIPFIRARDIVKSYAGQSASEKQRSLQQAITGHYQTLFSQAQTLSVENQ
AEDTRLPIIATGHLTTIGASLSESVRDIYIGTLEAFPASEFPAADYIALGHIHRPQKVTK
SEHIRYSGSPIALSFDEAKTEKSIVIAEFKNGELSNVELCPVPCFQALAMVKTELETLTD
NIMAVVEANHSERKENIWLDIEIESAEYLQDLSVRIEQIIADLPVEVLLVRRSKKSRLEM
PSHEKKITLSELSVQDVFDARMELESWQSDEQQQRRTRLNSLYLDIAEQTQLASSAAHSP
ELNSIIDNSSDSKTEQK
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgcgaattatccacacttctgactggcacttaggccaacatttttacggcaaaagtcgt
gcgcctgaacaccaaaaattcttgaattggctcattgagcagtcgcaaagtcagcagatt
gacgcgattattgtcgctggtgatattttcgatacgggcacaccaccaagttatgcccgt
gaaatgtattttgatttcatcgctaagttacatcaggccaattgccaattagtggtgtta
gcaggtaatcatgactcggttgctatgctgtcagagtcgcagaatttacttcagcagctt
tctactcgcgttatttctgcggtcagtgataatatggccgagcaagtatttgtgctaaat
agcctaaaaaccgagcagcaagcggtgatctgcgcgattccttttattcgagcgcgcgat
attgtcaaaagttatgctgggcaatcagcgagtgaaaaacaacgttcgttgcaacaagca
atcaccggtcattatcaaaccttatttagccaagcacagactttgtcagttgaaaatcaa
gctgaagatacgcgtttaccgattattgccaccggacatttaacgaccattggcgcatcg
cttagcgagtcagtacgtgatatttacattggtactttagaagcctttcctgccagcgaa
tttccagcagctgactatattgctttaggccatattcaccgaccacaaaaagtaactaag
agtgaacatattcgctatagcggctcaccgattgctttaagttttgacgaagcgaaaacc
gaaaagagcattgttattgctgagtttaaaaatggtgaacttagcaatgttgaattatgt
cctgtgccgtgttttcaagccttggcgatggtcaaaactgaactagaaacattaactgac
aatattatggccgttgtcgaagccaaccatagtgagcgaaaagagaatatctggctcgat
atagaaattgaaagtgcagaatatttacaagatttaagtgtgcgcattgagcaaataatt
gcagatttaccggtagaggttttattagtcagacgcagtaaaaaatctcgtttagaaatg
cccagtcacgagaaaaaaatcaccttaagtgaattgagcgtacaagatgtttttgatgct
cgcatggagttagagtcttggcaaagtgatgagcaacaacagcgccgaacgcgtttaaat
agcttatatctcgatattgccgagcaaacccaacttgccagctctgctgcgcattctcca
gaactaaatagcatcatagataatagctctgatagcaaaacggagcagaaataa
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