Colwellia sp. Arc7-635: EKO29_08915
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Entry
EKO29_08915 CDS
T06022
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cov03016
]
EKO29_08915 (truB)
Enzymes [BR:
cov01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EKO29_08915 (truB)
Transfer RNA biogenesis [BR:
cov03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EKO29_08915 (truB)
Prokaryotic type
EKO29_08915 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AZQ84128
UniProt:
A0A3Q9G5Z4
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All DBs
Position
2045270..2046211
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AA seq
313 aa
AA seq
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MAKKRKGRAINGVLLLDKPYDMSSNSALQKVKHIYFAQKAGHTGALDPLATGMLPICLGE
GTKFSQFLLDTDKTYQVTAKLGVRTTTSDIDGDVVSERPVEVSAEQLAVALASFRGTTKQ
VPSMYSALKYQGQPLYKYAREGIEVPRESRDITVFRLDLLRFEGDEVDLDIHVSKGTYIR
TIVDDLGELLGCGAHVANLRRSAVGNYPTERMVTMEQLTTLLAQAEAEEVAPSVYLDPLL
LPMTSACDGIPVVFVDDMSANFLRHGNPVQCSNAPSEGLVQVFIGDDVESGEFIGVGHID
EDGLVAPKRITVI
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaaagaaaaggtcgtgctattaacggtgttttgttacttgataaaccttat
gacatgtcgtcgaatagtgctttgcaaaaagttaagcatatctattttgcacaaaaagca
ggtcatactggtgcgttagacccactagctacaggcatgttacccatttgcttgggtgag
gggactaagttctctcagtttttacttgatacagataaaacttatcaagtaacggctaag
ctaggtgtacgtacaacaacaagcgatattgacggtgacgtggttagtgagcgtcctgtt
gaggttagcgccgagcaattagcggtagcgttagcatcatttcgtggtacaacgaagcaa
gtaccatcaatgtattctgcattaaaatatcaagggcaacctttatataaatatgcacgt
gaaggcattgaagtaccaagagaatcacgtgatattacggtatttcgtttagatcttctg
cgctttgaaggtgatgaggtcgacttagatattcatgtttcaaaaggcacttatattcgc
acgattgttgatgacttaggcgagcttttgggctgtggagcgcatgttgctaacctacgt
cgcagtgctgtgggtaattacccaactgagcgcatggtaacaatggaacaattaacaaca
ttgttagcacaagctgaagctgaagaagtagcgccatcggtatatttagatccattatta
ttaccgatgacatcagcttgtgatggtattccagtcgtttttgttgatgatatgtcagcg
aattttttacgccatggtaatccagtgcaatgttcaaatgcgcccagtgaaggtttagta
caagttttcattggcgatgatgttgaaagcggtgagtttattggtgtcggtcatattgat
gaagacggcctagttgctcctaaacgcatcactgtaatataa
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