Colwellia sp. Arc7-635: EKO29_09220
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Entry
EKO29_09220 CDS
T06022
Name
(GenBank) succinyl-diaminopimelate desuccinylase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00300
Lysine biosynthesis
cov01100
Metabolic pathways
cov01120
Microbial metabolism in diverse environments
cov01230
Biosynthesis of amino acids
Module
cov_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EKO29_09220
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cov01002
]
EKO29_09220
Enzymes [BR:
cov01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
EKO29_09220
Peptidases and inhibitors [BR:
cov01002
]
Metallo peptidases
Family M20
EKO29_09220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Peptidase_M18
Motif
Other DBs
NCBI-ProteinID:
AZQ84185
LinkDB
All DBs
Position
complement(2114129..2115277)
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AA seq
382 aa
AA seq
DB search
MNKHSNSTISLAQALIERPSVTPEDFGCQQLMAERLAALGFNNESMVFEDTTNLWSRRGN
SGPVFCFAGHTDVVPAGNLESWNTPPFEPVISDGMLYGRGAADMKGSLAAMIVATERFVA
DYPNHQGSIAFLITSDEEGPFINGTTRVIDTLEARNEKIDYCIVGEPSSTSKLGDVVKNG
RRGSITGELHIHGKQGHVAYPEHVINPIHQAMPVLAQLSEMHWDNGNDYFPPTSFQLSNI
ESGTGATNVVPGHLTAIFNLRYSTELTAEMIVEKVEALLTQQQLNYELNWTFNGQPFITE
PSTLVDSVVQAIETCCDISPELSTSGGTSDGRFIAPTGAQVIELGPCNATIHQVNECVAV
DDLILLTDVYYQTLINALTNDG
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaataaacatagcaatagtactatttcactagcgcaagcattaattgaacgcccatca
gtgactccagaagattttggttgccagcagttaatggcagagcgcttagccgcgttaggc
tttaataatgaaagcatggtttttgaagacaccacaaacttatggtcacgaagaggtaat
tcaggacctgtcttttgttttgctggtcataccgatgttgtgcctgccggtaatttagaa
agctggaacacaccaccttttgagcccgtaattagcgatggcatgctttatgggcgtggt
gcagcagatatgaaaggcagtttggctgctatgatagtggccactgagcgctttgttgca
gactatccaaatcatcaaggctcaatcgcatttctaatcactagcgatgaagaaggaccg
tttattaatggcaccactcgggttattgatacacttgaagcacgaaatgaaaaaattgat
tattgtattgttggcgaaccttccagtacaagtaaattaggtgatgtcgttaaaaatggc
cgtcgcggttcaatcacgggcgaattacatattcacggtaagcaaggacatgttgcctac
cctgaacacgtgattaatcccattcaccaagctatgccagtattagcacagttgagcgaa
atgcattgggataatggtaatgattattttccaccaacaagctttcaactttctaatatt
gaatcgggtacgggcgcgacgaatgtagtgccagggcatttgacagcgatatttaattta
cgctacagcactgaattaacagcagaaatgattgttgagaaagtagaggcgttattaacg
cagcagcaacttaattatgaacttaattggacatttaatggtcagccttttatcactgaa
cctagtacattggttgattcagtagtacaagctatcgaaacctgttgtgatatctctcca
gagctttccaccagtggtggcacctctgatggtcgctttatagcgcctacaggtgcacaa
gtgattgaacttggcccttgtaacgcgactattcatcaagttaatgaatgtgttgcagta
gatgatttgattttattaacggatgtttattaccaaaccttgattaatgcgctaacaaac
gatggctaa
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