Colwellia sp. Arc7-635: EKO29_10230
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Entry
EKO29_10230 CDS
T06022
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K13888
membrane fusion protein, macrolide-specific efflux system
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cov02000
]
EKO29_10230
Transporters [BR:
cov02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EKO29_10230
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
BSH_RND
Beta-barrel_RND
RND-MFP_C
BSH_CzcB
HH_MFP_RND
Beta-barrel_YknX
BSH_YknX
Biotin_lipoyl
BSH_CusB
YknX_C
HH_AprE
CzcB_C
CC_Bre1
CEP170_C
DUF4407
HH_EMRA
Motif
Other DBs
NCBI-ProteinID:
AZQ84361
LinkDB
All DBs
Position
2336812..2338053
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AA seq
413 aa
AA seq
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MKKNIKKTLLLVLFIAVIIAGAGYKYSLSQQVQTVFITDSVTRGNIESVVLTNGVLYPSK
LVSVGAQISGLIEKIGVQLGDEIKQGDFIAQIDNLTQKNALKEAEALLKSIDAQLRAKQA
QIKVATAEFTRSKKMVATSASSQSDYDTAESVLAVYRAELDQLSAEKEKSIISVDNAQVN
LGYTLIESPINGTVIYVSVEEGQTVNNNQGTPSIIELAQLDVMTIKAQVSEADIINVSAG
QKVYFTILGATGKKYYGVLRAIEPGPTLLSGDDSSLKIGDDEAIYYNALFDVENPDKLLR
FGMTTQVSIILEKAENALLVPSQVLVKRSGLKASYQVLVKNGDQAEYRNVDVGINNKIYA
QILSGLNEGDEIVISQSSGLDGTTSSNGIASSMAGLAGGSTRGQGGPGAGRGL
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaaacattaaaaagaccttactattagtcctttttatcgccgttatcatcgca
ggtgcaggctacaaatacagcttgtcacagcaggtacaaacggtatttatcaccgatagt
gttacgcgaggcaatattgagagtgtggtactcacaaacggtgtgttatatccgtctaaa
ttggtcagtgttggtgctcaaatttcagggctgattgaaaaaattggtgttcagttgggc
gatgaaattaagcaaggtgattttattgctcaaatcgataatttgacccaaaaaaatgct
ttaaaagaagccgaagctttactcaagagtattgatgctcagttacgggcaaaacaagct
caaattaaagtggcgacagctgagtttacgcgaagcaaaaagatggtggcgactagcgcg
agttcacaatcggactatgacacggctgaatctgtactggcagtttatcgagcagagcta
gatcaattaagtgctgagaaagagaaatctattatcagtgtcgataatgctcaggttaat
ttaggttacacccttattgagtcgcctatcaacggcacagtcatctatgtttcggtggaa
gaaggacagacggtcaataacaatcaaggtacgccgagtattattgaactagcacagctt
gatgttatgaccattaaggcgcaggtttctgaagccgatattataaacgttagtgcaggg
caaaaagtttatttcactattttgggtgcaacaggcaagaaatattacggtgttttacgc
gccattgagccaggcccaacattacttagcggtgacgatagctcgttgaaaattggtgac
gatgaagcgatttattacaatgcgctgtttgatgttgaaaacccagataagttattgcgc
tttggcatgacaacacaagtttctattattcttgaaaaagcagaaaacgccttactggta
ccatcacaggtgttagttaaaagatctggcctaaaggcttcttatcaggtgctagtaaaa
aatggcgaccaagctgaatatcgaaatgtcgacgttggcattaataataaaatatacgca
cagatattatcagggctgaacgaaggtgatgagatagtgattagtcagtcttcaggtctt
gacggaacgacttcctctaacggtatagccagctcaatggcgggattagcaggtggcagt
acgcgcggacaaggtggaccgggcgcaggtaggggattataa
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