Colwellia sp. Arc7-635: EKO29_10925
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Entry
EKO29_10925 CDS
T06022
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cov03032
]
EKO29_10925 (ihfB)
03036 Chromosome and associated proteins [BR:
cov03036
]
EKO29_10925 (ihfB)
03400 DNA repair and recombination proteins [BR:
cov03400
]
EKO29_10925 (ihfB)
DNA replication proteins [BR:
cov03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
EKO29_10925 (ihfB)
Chromosome and associated proteins [BR:
cov03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
EKO29_10925 (ihfB)
DNA repair and recombination proteins [BR:
cov03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
EKO29_10925 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
UPF0181
HU-CCDC81_euk_2
DUF2267
HU-DNA_bdg
VWA_3
NGO1945_C
Motif
Other DBs
NCBI-ProteinID:
AZQ84479
UniProt:
A0A3S9Q635
LinkDB
All DBs
Position
complement(2507980..2508267)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLADKLNHLAAKDVEQAIKEILEMMAQTLSKGERIEIRGFGSFSLHYRAPRV
GRNPKTGESVELDGKYVPHFKPGKELRERVNLSIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaatcagaactcattgaaagattagcagataaattaaatcatttagctgcgaaa
gatgtagaacaagctattaaagaaattcttgaaatgatggcgcaaaccttgtcgaaaggt
gaacgtattgaaattagaggttttggcagcttttcgttgcattatcgtgctccacgcgtg
ggacggaacccgaaaactggcgagtctgttgaacttgacggaaagtatgttccgcatttt
aaaccaggtaaagaattacgtgaaagagtaaatctttcaatcgcgtaa
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