Colwellia sp. Arc7-635: EKO29_11340
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Entry
EKO29_11340 CDS
T06022
Name
(GenBank) serine--tRNA ligase
KO
K01875
seryl-tRNA synthetase [EC:
6.1.1.11
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
EKO29_11340
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
cov01007
]
EKO29_11340
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cov03016
]
EKO29_11340
Enzymes [BR:
cov01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.11 serine---tRNA ligase
EKO29_11340
Amino acid related enzymes [BR:
cov01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
EKO29_11340
Transfer RNA biogenesis [BR:
cov03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
EKO29_11340
Prokaryotic type
EKO29_11340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2b
Seryl_tRNA_N
DUF4110
Motif
Other DBs
NCBI-ProteinID:
AZQ84558
UniProt:
A0A3S9Q6M7
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All DBs
Position
complement(2608649..2609929)
Genome browser
AA seq
426 aa
AA seq
DB search
MLDPKYLRTDIENTAAELAKRGYTLDTAQLIELEEQRKAIQMNTQELQSQRNTRSKSIGQ
AKARGEDIQPLLAEVSKLGDELEAAKEEQTQVLAKIDLIASAIPNLIHESVPAGASEDDN
VEIKRWGTPRVFDFEVKDHVDVASALDKGLDFESGAKLAGTRFAVMRGQIAKLHRALAQF
MLDVHSEEHGYQEMYVPYLVNHESLYGTGQLPKFGEDLFHTELNNKKLSLIPTAEVPLTN
LVRDEILDEQDLPIKMCAHTPCFRSEAGSYGRDIRGLIRQHQFDKVEMVQIVKPEDSFQA
LEDLTGHAEKILEKLELPYRTVVLCTGDIGFSATKTFDIEVWLPAQNTYREISSCSNMGD
FQARRMQARYRSSESNKPELVHTLNGSGLAVGRTLVAVIENYQQADGSINVPTVLQPYMK
GCTNIS
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgcttgatccaaaataccttagaacagacatagaaaataccgcagctgaacttgctaaa
cgtggatacacgctagacaccgctcaattaattgagttggaagagcaacgtaaagctatc
caaatgaacacgcaagagttacagagtcagcgtaacactcgctctaagtcgataggacaa
gccaaagcacgcggcgaagatattcagccattattggcagaagtgagtaagcttggtgat
gaattagaagcagcgaaagaagagcaaacacaagtattagcaaaaattgacttaattgct
tcagccataccaaatttgatccatgagtcagtacctgcaggcgcaagtgaagacgacaac
gtagaaataaaacgttggggtacgccgcgtgtattcgattttgaagtaaaagaccatgtc
gatgttgcatcggcactcgacaaaggcttagattttgaaagtggtgctaaacttgccggt
acacgctttgctgtaatgcgcggtcaaatcgctaaattacaccgtgccttagcgcaattc
atgttagacgtgcatagtgaagagcatggctatcaagaaatgtacgtgccttacttggta
aaccacgagtctttatacggtacagggcaattaccaaaatttggtgaagatttatttcac
accgaattaaacaacaaaaagctttctttgatcccaacagctgaggttccgttaacgaac
ttagtgcgtgatgaaattttagatgagcaagacctacctattaaaatgtgtgctcatacg
ccatgttttcgaagtgaagccggttcatacggccgtgacattcgcggtttgatccgtcag
catcagttcgataaagttgaaatggtacaaattgttaaacctgaagattcttttcaagca
ttagaagacttaaccggtcatgcagagaaaattcttgagaaactagaattgccttaccgc
actgtggttttatgtacgggcgatatcggttttagtgccaccaaaacttttgatattgaa
gtttggttaccagcacaaaatacttaccgtgaaatttcatcttgttcgaatatgggtgac
ttccaagcccgtagaatgcaagcaagatatcgcagtagtgaaagcaataaaccagagctt
gtgcatacgcttaatggctcaggtttagctgtaggtcgcacactcgttgcggtaatcgaa
aactatcagcaagctgacggtagcattaacgtgccaaccgttttacaaccgtatatgaaa
ggttgtaccaacattagctag
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