Colwellia sp. Arc7-635: EKO29_12480
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Entry
EKO29_12480 CDS
T06022
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov03030
DNA replication
cov03430
Mismatch repair
cov03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EKO29_12480
03430 Mismatch repair
EKO29_12480
03440 Homologous recombination
EKO29_12480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cov03032
]
EKO29_12480
03400 DNA repair and recombination proteins [BR:
cov03400
]
EKO29_12480
Enzymes [BR:
cov01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EKO29_12480
DNA replication proteins [BR:
cov03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EKO29_12480
DNA repair and recombination proteins [BR:
cov03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EKO29_12480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AZQ86327
LinkDB
All DBs
Position
complement(2856549..2857280)
Genome browser
AA seq
243 aa
AA seq
DB search
MEENKQDERLIILDTETTGINPREGHRIVEIGCVEMINRQLTGRSYHVYVKPMAQGMQMV
MDQEVINIHGLTDDFLRDKPVFGQIAQEFINFIQGARLVIHNAKFDVGFMDHEFAMMRGL
PKTTDICSITDTLKVSKDEFGSPKTLDYLARFYKVDKLIDRTYHGALIDAQLLAFVYIEM
TRKQATLNLQSGDSQAEDANAIRRVTLNRAKLKVLTATADEVTEHEKRLSIVNDEGATPL
WHN
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
attgaagaaaacaagcaagacgaacgactgatcatactcgatacggaaaccacgggtata
aacccacgtgagggacaccgtattgttgaaattggttgtgtagaaatgatcaatcgtcaa
ctaaccggtcgaagctatcatgtatacgtcaagcctatggcgcagggtatgcaaatggta
atggaccaagaagttatcaatattcatggcctgaccgatgactttttacgtgacaaacct
gtatttggacaaatagcacaagagtttattaatttcattcaaggtgctcgtttagttatt
cataatgccaagtttgatgttggttttatggaccatgaatttgcaatgatgcgaggcctg
ccaaaaacaacagacatatgtagcattactgatacattaaaagtatcgaaggatgaattt
ggctcacctaaaaccttagattatttggcccgtttttataaagtcgataaattaatagac
cgtacctatcatggcgcgttgattgatgctcaattactggcatttgtttacattgaaatg
acacgtaagcaggcaacgttaaacttgcagtcaggtgacagccaagccgaagacgctaat
gctattcgtagagtcactctcaaccgtgctaaattaaaggttttaactgcaactgccgat
gaagtcacagaacacgaaaaacgtttgagtatcgttaatgacgaaggggctacgccacta
tggcacaattaa
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