Colwellia sp. Arc7-635: EKO29_13250
Help
Entry
EKO29_13250 CDS
T06022
Name
(GenBank) lytic murein transglycosylase
KO
K08305
peptidoglycan lytic transglycosylase B [EC:
4.2.2.29
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
EKO29_13250
Enzymes [BR:
cov01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EKO29_13250
Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EKO29_13250
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SLT_2
PG_binding_1
PG_binding_2
GUN4
Glucosaminidase
Motif
Other DBs
NCBI-ProteinID:
AZQ84873
LinkDB
All DBs
Position
3060135..3061421
Genome browser
AA seq
428 aa
AA seq
DB search
MHSSNHLIKKVSKFFHYRKLLTVSAFLPLLAQASIADENFQQCKVNLAERAQSAGFSSYI
TETVIDGIAPIERVIALDKKQPEFTQTFEQYIKTRVSTYHLRVGREKLIQNKELFDDLEK
KYGIPRQYLVSFWGLETVFGKHKGKMSVLNSLATLACDQRRSEFFTLELLNLFTLIDTEK
VSLEQLKGSWAGAMGHMQFMPTAFLQYAIDADNDGKVDIWQSEADALTTAANYLNKIGWQ
SKERWGREVKLPENFAFDKVAFDQYYPLSYFQQLGVLKTDSKPLSNYDIKAELFLPSGHK
GPAFLLYPNFNVIMKWNLSKSYALSVGILANKLVGAKGVEFLQKSPTQEKPYSIVQMKNL
QSQLNTLGFETGEPDGIWGPKSRDAIRSFQLQHALIADGYPNKTVFSTIESVISKAEVIA
PKLNQASE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgcactcttccaatcatcttataaaaaaagtaagtaaattttttcattaccgaaaactt
ctcactgtaagcgcatttcttcccttattggctcaagcaagcattgccgatgaaaatttc
caacaatgtaaagtcaatttagccgaacgagcccaaagcgcaggattttcatcttatata
accgaaacagttatcgacggtattgctccgattgaacgcgttatcgcgctagataaaaaa
caacctgaattcacccaaacctttgagcaatatattaagactagagtcagcacttatcac
ttgcgcgtaggtagagaaaaactaatacaaaacaaagaattatttgatgatttagaaaaa
aaatacggtatcccacgtcaatacttagtctcattctggggcttagaaaccgtttttggt
aaacacaaaggtaaaatgtcggttctcaactcattggcaacactggcctgtgatcaacgc
cgcagtgagtttttcaccttagagctattaaatttattcactttaatagacactgaaaaa
gtatcgttagagcaactaaaaggttcttgggccggtgccatgggtcatatgcaatttatg
ccaacggcattcttacaatatgcaattgacgccgataatgacggtaaagtcgatatttgg
cagagtgaagctgacgccttaacaacagccgccaattatttaaataaaatcggttggcag
tcgaaagaacgttggggaagagaagttaaactaccagaaaactttgcttttgataaagtc
gcttttgaccaatattatccactgagttatttccaacaactaggcgtactaaaaacagac
agcaaaccattgtctaattatgacattaaggctgagttgtttctcccttcaggtcataaa
gggccagcatttttgttataccctaacttcaatgtcattatgaaatggaacctttcaaaa
agttatgctttgtcggttggtattttggcgaacaaattagtcggggctaaaggtgttgaa
tttttacaaaaatcgccaacacaggaaaagccttacagtattgttcaaatgaaaaatcta
caaagccaacttaataccttaggatttgaaaccggtgaacccgatggtatctggggaccg
aaaagtagagatgctattcgctcatttcaactacagcacgcgcttatcgctgacggttat
cccaataaaacggtattttcaacgattgagtcggtcatcagcaaagctgaagttattgca
cctaagctcaatcaagccagcgagtag
DBGET
integrated database retrieval system
