Colwellia sp. Arc7-635: EKO29_13520
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Entry
EKO29_13520 CDS
T06022
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00260
Glycine, serine and threonine metabolism
cov00460
Cyanoamino acid metabolism
cov00630
Glyoxylate and dicarboxylate metabolism
cov00670
One carbon pool by folate
cov00680
Methane metabolism
cov01100
Metabolic pathways
cov01110
Biosynthesis of secondary metabolites
cov01120
Microbial metabolism in diverse environments
cov01200
Carbon metabolism
cov01230
Biosynthesis of amino acids
cov01240
Biosynthesis of cofactors
cov04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EKO29_13520
09102 Energy metabolism
00680 Methane metabolism
EKO29_13520
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EKO29_13520
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EKO29_13520
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EKO29_13520
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EKO29_13520
Enzymes [BR:
cov01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EKO29_13520
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AZQ84918
UniProt:
A0A3Q9GCL4
LinkDB
All DBs
Position
complement(3131087..3132382)
Genome browser
AA seq
431 aa
AA seq
DB search
MKSTYTSHDLEHFFSAKLPETDGAIQVAIDLEIKRQEQQIELIASENIVSKAVMDTQGSI
LTNKYAEGYPGRRYYGGCEHVDLVETLAIDRAKQIFNAKYVNVQPHSGAQANGAVMLALV
KPGDTILGMSLDAGGHLTHGARPAQSGKWFNAIQYGVRKDDMLIDYDEVLALAKEHQPKM
IIAGGSAIPRKIDFSKFRAIADEVGALLMVDMAHIAGLVATGHHQNPLPYADVVTTTTHK
TLRGPRGGLILTNDETIAKKINSAVFPGLQGGPLMHVIAAKAVALGEVLEPEFTAYIKNV
LSNANVLAETLQKRGCDIVTGGTDTHLMLVDLRPKGLKGNAAEESLERAGITCNKNGIPF
DSEKPMVTSGIRLGTPAGTSRGFGNAEFELIGQWIGDVLDGLAANPENNSLVEQAVQQQV
KQLCEKFPLYN
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagtacttacacttcacatgacttagaacacttcttttcggctaaattacctgaa
acagatggcgctatacaagtcgctattgatttagagataaaacgacaagagcaacaaatt
gagttaatagcctcagaaaacattgtgtctaaagcggtcatggatacgcaaggtagtatt
ttaactaataagtatgctgaaggttatccaggacgtcgttattacggtggctgtgaacat
gttgatttggttgaaacgctagcgattgaccgcgcaaagcaaatctttaatgccaagtac
gttaatgttcaacctcattctggtgctcaagccaacggtgccgtgatgctagccttagta
aagcccggcgatactatcttgggtatgtcacttgatgctggcggacaccttacacatggc
gctcgacctgcacaatcaggtaaatggtttaatgccattcaatatggcgtacgcaaagac
gatatgcttatcgactacgatgaagtgcttgcattagctaaagagcatcagccaaaaatg
attatcgctggaggctctgctattccacgaaaaattgatttttcaaagtttagagcaatc
gcagatgaagtaggggctttgttgatggtcgatatggctcatattgccggtcttgttgcg
acagggcatcaccaaaatccacttccttatgctgacgtggttacaaccacgactcataaa
accctacgtggacctcgtggcggactgatcttaaccaatgatgaaaccatcgcaaaaaaa
attaactctgctgtattccctggccttcaaggtggtccacttatgcacgttattgcagct
aaagcggttgctttaggtgaagtgcttgagcctgaatttaccgcttacattaaaaatgtt
ttaagtaacgccaatgtattagccgaaacattgcaaaaacgcggttgtgacattgtcact
ggcggtacagatacacacttaatgttggttgatttgagaccaaaaggcttaaaaggcaat
gctgcagaagaaagtttagagcgtgcaggtattacctgtaacaaaaatggtattccgttt
gattctgaaaaacctatggtgacctcgggtattcgtttaggtactccagcgggtactagt
cgaggattcggtaatgctgaatttgaattaatagggcaatggattggtgatgtacttgat
ggtttagccgcgaatcctgaaaacaatagccttgttgaacaggccgtacagcagcaagtg
aaacaactttgcgaaaaattccctttatacaattaa
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