Colwellia sp. Arc7-635: EKO29_14635
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Entry
EKO29_14635 CDS
T06022
Name
(GenBank) pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cov03009
]
EKO29_14635
Enzymes [BR:
cov01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
EKO29_14635
Ribosome biogenesis [BR:
cov03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
EKO29_14635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
DUF5818
Motif
Other DBs
NCBI-ProteinID:
AZQ85109
UniProt:
A0A3Q9GCW0
LinkDB
All DBs
Position
complement(3386278..3386967)
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AA seq
229 aa
AA seq
DB search
MRLDKFICKSTELTRTEAKKLLKMGKVTVNDVAIKDPATQVHENNDICIEGEMLTARSSR
YIILHKPLDTICSNVDELYPSLLHLIDVDRAFDMHIAGRLDADTTGLVLVTDDGRWSHNI
ISPKKQCEKVYRVWLRNPLREDTAEKFTHGVQLQGEDDLTRPAKLTQVAEKEVLLTITEG
KYHQVKRMFAAVGNKVVGLHREQIGPVKLADLPLAQWRYLTNDEVEAFL
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgcgcctcgataaatttatttgcaaaagcactgaacttacccgcaccgaagctaaaaag
ctgctcaaaatgggtaaagtaaccgttaatgatgttgctattaaagatcccgcaactcag
gtgcatgaaaataatgacatttgtattgaaggtgaaatgcttaccgcacgtagctctcgc
tatattattttgcacaaaccgcttgataccatttgttcaaatgttgatgaattatatccg
tcgttgttgcatttaattgatgttgatcgggcttttgatatgcacatagcagggcgttta
gatgccgacaccaccggtttagtgctagtgactgatgatggtcgttggtcgcataatata
atttcgcctaaaaaacaatgtgaaaaggtctatcgtgtttggttacgtaatccattaagg
gaagataccgcagaaaagttcacccatggcgtgcaattgcaaggtgaagatgacttaaca
agaccagcaaagttaacacaagtggcagaaaaagaagtgttgttaacaataaccgaaggc
aaatatcatcaagtgaaacgcatgtttgctgctgtcggtaataaagtggtcggtttacat
cgagagcaaatcggaccggtaaaattagctgatttaccattagcgcagtggcgctattta
actaacgatgaagttgaagcctttttatag
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