Colwellia sp. Arc7-635: EKO29_14835
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Entry
EKO29_14835 CDS
T06022
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cov03016
]
EKO29_14835 (truD)
Enzymes [BR:
cov01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
EKO29_14835 (truD)
Transfer RNA biogenesis [BR:
cov03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EKO29_14835 (truD)
Prokaryotic type
EKO29_14835 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
BCSC_C
Motif
Other DBs
NCBI-ProteinID:
AZQ86365
UniProt:
A0A3S9QBK5
LinkDB
All DBs
Position
complement(3440329..3441648)
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AA seq
439 aa
AA seq
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MKTENNKPVTKIDNQSELITAVESVTEAGVQAQAKVKAHEVQIETQTDAQPAEAKAPEQS
QSPLPEFSYLYGKPKSTGLLRSEKSDFKVFEQIPFQPCGEGEHLFIHIRKTGANTAFVAK
QLAQYFSVKESLVSYAGLKDRFAVTEQWFGVHVPGKQTYDLSDLNIEGVEVLTAKRHNKK
LRIGSLDGNRFEITLRDVTDIDELVRRWHVVSNFGVPNYFGEQRFGINGGNIEKALGLFS
GRKVQDKKKRGMYLSAARSLIFNQIISARIEQQNFDNILNGDVLMLAGTQSVFLADTVDE
SLTKRFTEHDLDITAPMWGAGELMTTTDAREFEQSIASELQAFCEGLPRFGLKQERRRTR
LVIKDADIKVDNDIVTLSFFLPAGAYATTIMRELIAYKDMTERVDVDANRRMNAESNVKK
SLTNHSTSNSTNNSSNFKG
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgaaaactgaaaataacaagccggtaaccaaaattgacaatcaaagtgaattaataaca
gctgtagagtcagtgactgaagccggagttcaagcccaagctaaagtgaaggctcatgaa
gttcagatcgaaactcaaactgatgcccaaccagcagaagctaaagcaccagagcaaagt
caatcaccactgcctgagttttcctatttatacggtaaacctaaatcgactggcctatta
cgcagcgaaaaatcagattttaaagtttttgaacaaatacctttccaaccttgtggcgaa
ggagaacacctgttcattcatattcgaaaaactggtgccaataccgcttttgttgccaag
caattggcgcaatatttttctgtgaaagaatcattggtttcttatgctggtttaaaagac
cgctttgcggtgactgaacaatggtttggtgtgcatgttcctggtaagcaaacttatgac
ttaagcgatttaaacatcgaaggtgttgaagtgctaaccgctaaacgtcataacaaaaaa
ctgcgtattggtagtttagacggtaaccgttttgaaataaccttacgtgatgtaacagat
attgatgaattggttagacgttggcatgtagtgagtaattttggcgtaccaaattacttt
ggcgagcaacgttttggcatcaatggcggcaatattgaaaaagccttaggtttattttct
ggtcgaaaagttcaagacaagaaaaagcgcggtatgtatttatcagcagcacgttcattg
attttcaatcaaataatcagcgcacgcatcgaacaacaaaactttgataacatacttaat
ggcgatgttttgatgttagcgggtacacaatctgtatttctagccgatacggttgatgaa
agcttaaccaaacgattcacggagcatgatctcgacattacagcaccaatgtggggagct
ggtgagcttatgacaaccacagatgctcgggagtttgagcaaagtattgctagcgaacta
caagcattttgtgagggcttaccgcgtttcggtttaaagcaagaacgtcgacgtacgcgt
ttagtgattaaagatgcggatataaaagtcgataatgatattgtcaccttgtcatttttc
ttgcctgcaggggcttatgcgacaacaattatgcgcgagttgattgcctataaagacatg
acagagcgtgttgatgttgatgctaatagacgtatgaatgcggaaagtaacgtgaaaaaa
agtttaacaaatcattcaacaagcaattcaacaaataacagtagcaattttaaaggctga
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