Colwellia sp. Arc7-635: EKO29_16335
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Entry
EKO29_16335 CDS
T06022
Name
(GenBank) septal ring lytic transglycosylase RlpA family protein
KO
K03642
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
EKO29_16335
Enzymes [BR:
cov01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EKO29_16335
Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EKO29_16335
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DPBB_1
SPOR
Motif
Other DBs
NCBI-ProteinID:
AZQ86381
UniProt:
A0A3Q9GFU5
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All DBs
Position
3802691..3803605
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AA seq
304 aa
AA seq
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MLVVLLSACSTYNGRYQQKYDSTPKRLPSASELHNATPRAEQHSRGGNKDYQVRGKHYKV
LKSAESFQQTGIASWYGRKFHGHLTSNGEIYDMYAMSAAHKNLPLPTYLKVVNNDNGQSV
VVRVNDRGPFHASRIIDLSYSAAYKLDMLKTGTANVTVTAVTDFSVQGLKQLEPGNSSIN
QTTSPSPRFNEPISTPDNTLATVDINTDKVTESVSALTNVAGNTSTVASKALKGEYIQVF
ASSSNIQAKKIANELSAQYQINTLLEKKNGIFRVLAGPIERSDELTRLLLAIKKNKHPKA
FIRK
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atgcttgttgtactgctatctgcatgtagtacttataatggtcgataccaacaaaaatat
gatagcacgccaaaacgcttacctagcgctagcgaacttcataatgcgacacctcgagct
gagcaacacagtcgtggcggcaataaagattatcaagtgcgaggcaagcactataaagta
ttaaaaagtgctgaaagttttcaacaaacaggtattgcctcttggtatggccgcaagttt
catggccatttaacctctaatggtgaaatttatgacatgtacgcaatgagcgccgcacat
aaaaatttacccttaccgacctatttaaaagtcgttaacaatgacaatggacaatcagtt
gttgttagagttaatgatcgcggtccttttcatgccagtcgcattatcgacttatcttat
agcgctgcatataaactagacatgctaaaaacgggcactgcaaatgtaaccgttacggca
gtcactgactttagtgttcagggtttgaaacaattggagccaggcaattcatcaataaac
caaacaactagtccctctccccgtttcaatgaacctatttccactcctgataatacttta
gcaacggtagatattaatacggacaaagtaacagaatcagttagtgccttaacaaatgta
gcgggtaatacgtcaaccgtagcaagcaaagccttaaaaggcgaatatatacaggtattt
gcaagtagtagtaatatacaagcaaaaaaaattgccaatgaactttcggcgcaatatcaa
ataaatacgctgttagagaaaaaaaatggaatttttcgtgttcttgctggtccgatagag
cgtagcgatgaattaacgcgattattattagcgattaagaaaaataaacaccctaaagca
tttattcgaaagtga
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