Colwellia sp. Arc7-635: EKO29_16340
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Entry
EKO29_16340 CDS
T06022
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00550
Peptidoglycan biosynthesis
cov01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EKO29_16340
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cov01002
]
EKO29_16340
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
EKO29_16340
Enzymes [BR:
cov01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EKO29_16340
Peptidases and inhibitors [BR:
cov01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
EKO29_16340
Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
EKO29_16340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
CytoC_RC
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
AZQ86382
LinkDB
All DBs
Position
3803830..3805008
Genome browser
AA seq
392 aa
AA seq
DB search
MKVTRIPKTSTKLLTFLGSVLLSVCSLSQAQTIIPSAPEVNAKGHILIDYTTGKVIAQSN
ADILLAPASLTKMMTSYIIGKELDSGNIKNEDVVKISEKAWAKNFPDSSKMFIEVGTEVP
VSLLNQGIIVASGNDACVAMAEHIAGSEDAFAQLMNAHAEQLGMHSSFFENSHGLDSKEH
KTTARDMATLAIALIRDVPNEYKLYSQKSFTYNNIKQYNRNSLLWDKSMNVDGLKTGHTS
QAGYSLVTSATKGDMRLVSVVMGTESERARKVESKKLLNYGFRFFETYTPYKAGEKFVSD
RVWMGDQKEVDLGIMVDTPITIPRGQRKNLQANFELDKQLTAPLQKGEVVGKLFLQLDGE
DIAQYPLVTLQEVKEGGMLDKLMDYVKLQFVD
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttactcgaatccctaaaacctcaacaaagttacttacttttctaggctctgtt
ttattgagtgtttgctctctttctcaagcacaaaccattattccctcagcaccagaagta
aacgctaaaggtcatattttaattgactacactaccggtaaagttattgcacaaagcaat
gccgatattttactagcgccagcaagcttaactaagatgatgactagctacatcataggt
aaagagctcgacagcggtaatatcaaaaatgaagatgtcgttaagattagtgaaaaagct
tgggcgaaaaacttccctgattcatcaaaaatgtttattgaagttggtactgaagtacca
gtgagtttactcaaccaaggtattattgtcgcgtcaggtaatgacgcctgtgtggcgatg
gctgaacatattgccggtagcgaagatgcttttgcacagttaatgaatgcccatgccgaa
caattaggcatgcacagtagtttctttgaaaatagtcatggtttagatagtaaagaacac
aaaactaccgcccgtgatatggcaacattagcgattgctcttattcgtgatgtacctaat
gagtataagctgtacagccaaaaatcatttacttataacaacattaagcagtacaaccgc
aatagtttattgtgggataaaagcatgaatgttgatggtttaaaaacgggtcatacatca
caagcaggttacagcttagttacctcagcaactaaaggcgatatgcgtttagtgagtgta
gtaatgggcacagaaagcgaacgagcgcgtaaagttgaaagtaaaaagttattaaactac
ggcttccgttttttcgaaacttatactccttataaagcaggtgaaaaatttgttagtgac
cgtgtttggatgggcgaccaaaaggaagttgatttaggtattatggttgacacccctatt
actattcctcgtggccagcgtaaaaacttacaggcaaattttgaattagataagcaatta
accgcaccattacaaaaaggcgaagttgtcggtaaattatttttacagctggatggcgaa
gacattgctcagtacccattagtgaccttgcaagaagttaaagaaggtggcatgttggat
aagctaatggattacgtaaaacttcagtttgttgattag
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