Colwellia sp. Arc7-635: EKO29_16755
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Entry
EKO29_16755 CDS
T06022
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov02020
Two-component system
cov02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EKO29_16755
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EKO29_16755
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cov03021
]
EKO29_16755
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
cov02035
]
EKO29_16755
Transcription machinery [BR:
cov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EKO29_16755
Bacterial motility proteins [BR:
cov02035
]
Flagellar system
Flagellar assembly proteins
Stator
EKO29_16755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
HTH_38
GerE
Motif
Other DBs
NCBI-ProteinID:
AZQ85490
LinkDB
All DBs
Position
complement(3905043..3905756)
Genome browser
AA seq
237 aa
AA seq
DB search
MVKLHTYSVDKSALLEQHTVLVKRIAYHLLARLPASVIVDDLIQSGMIGLLEAANNFDNS
KGASFETFAGIRIRGAMLDEMRRGDWVPRSVHKNSRMISEAIKNLEAEHGRDITDIEVSE
KLDLSINQYHHMLNEVSSGKILGIDDLGVSEDVIEIAHSHQQDEPYANIEHSYFKKSLAE
CISSLPEREALVLSLYYDEELNLREIGQVLDVSESRVSQIHSQAMHRLKARMQAWQS
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
gtggtaaagttacatacttatagtgttgataaatcggctttgttggagcaacacacggtt
ctagtaaaaagaatcgcgtatcatttacttgctcgactacctgccagtgttatcgttgat
gatcttattcaatcaggcatgataggtttgctcgaagccgcaaataattttgataacagc
aaaggtgcaagttttgaaacttttgcaggtattcgaattcgtggtgctatgcttgatgag
atgcgccgtggtgactgggttccccgctcggtgcataaaaatagccgaatgattagtgaa
gctataaaaaacttagaagcagaacatggtcgtgatattaccgatattgaagtctctgaa
aaacttgatctttcgataaatcaataccatcatatgctcaatgaagttagctcaggtaaa
atattaggcattgatgatttaggcgtgagtgaagatgttattgaaatagcacatagccat
caacaagatgaaccttatgctaacattgaacatagttactttaaaaagtctctcgctgaa
tgtatttcatctttaccagaacgcgaagctttagtactgtcgttgtattatgatgaagaa
cttaatctacgagaaattggccaagtacttgatgtgagtgaatcacgagtaagtcaaata
cacagtcaggcaatgcatcgattaaaagctcgtatgcaagcgtggcaaagttaa
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