Colwellia sp. Arc7-635: EKO29_17990
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Entry
EKO29_17990 CDS
T06022
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00470
D-Amino acid metabolism
cov00550
Peptidoglycan biosynthesis
cov01100
Metabolic pathways
cov01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EKO29_17990
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EKO29_17990
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EKO29_17990
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
EKO29_17990
Enzymes [BR:
cov01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
EKO29_17990
Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
Precursor biosynthesis
Amino acid ligase
EKO29_17990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
GARS_A
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
AZQ85721
UniProt:
A0A3Q9GAT6
LinkDB
All DBs
Position
complement(4202492..4203427)
Genome browser
AA seq
311 aa
AA seq
DB search
MKALLAQKLAVLYGGTSAERAVSLNSGKAIAKGLKEAGFDVQLIDTQDYCLSDLATLDID
RVFIALHGRGGEDGCVQGALQYMNIPYTGSDVLGSALSMDKIRSKQVFQALNLPTAAFAI
VDKAQYQAGDAAKILQPLGNVVMVKPANEGSSIGMSKANNADELHQALIAAFEYDQQVLV
EAWIQGPEYTVAILGQTPLPVIHMETPNDFYDYAAKYQSTTTQYHCPCSLSADDEAELQS
IALKAFNATGAKGWGRVDVMRNEQGQWQILEVNTVPGMTETSLVPKAAKVYGLNFSELVT
KIVEISAQGSA
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcgttattagcacaaaaactagctgttttgtatggtggtacatctgcagaacga
gcggtgtcgttaaattcaggtaaagcgattgcgaaaggtttaaaggaagcgggttttgat
gttcaactaattgatactcaggattattgcttaagcgacttagcaacgcttgatatcgat
cgtgtgtttatcgccttgcatggtcgtggcggtgaagacggttgtgtgcaaggtgcattg
caatacatgaatattccttataccggttctgatgtactcgggtcggcattatcgatggat
aaaattcgtagcaagcaggtatttcaagcacttaatttacctactgcagcgtttgctatt
gtcgataaagcacagtaccaggctggcgatgctgcgaaaattttgcagccattgggcaat
gttgtcatggttaagcctgcgaatgaaggttcaagtattggcatgtcaaaagccaataat
gctgatgaattacatcaagcattaattgccgcttttgaatacgaccaacaagtactagtt
gaagcttggattcaaggacctgagtataccgtggctattttagggcaaacgcctttaccg
gtaatacatatggaaacaccaaacgacttttatgactatgcggcaaaatatcaatcgacc
actacgcaatatcattgcccgtgttcgttatcagctgatgatgaagctgagctgcaaagt
attgcccttaaggcttttaatgccaccggagcgaaaggttggggtcgagtagatgtgatg
agaaatgagcaaggacaatggcagatattagaagttaatacggtaccaggcatgacagaa
acatcgttagttcctaaagctgctaaagtttatggtttaaattttagtgagttagtgaca
aaaattgtcgaaattagtgcacaaggcagcgcataa
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