Colwellia sp. Arc7-635: EKO29_18325
Help
Entry
EKO29_18325 CDS
T06022
Name
(GenBank) EAL domain-containing protein
KO
K18765
RNase E specificity factor CsrD
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cov03019
]
EKO29_18325
Messenger RNA biogenesis [BR:
cov03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EKO29_18325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
Motif
Other DBs
NCBI-ProteinID:
AZQ85779
UniProt:
A0A3S9QAC3
LinkDB
All DBs
Position
complement(4281133..4282989)
Genome browser
AA seq
618 aa
AA seq
DB search
MLMLSKIKPIQQTKTKVLLMTFLLFYFLVCTFSTLAVYQVQNNQHHAIEAFNFNDQQLEN
YAKVPTLSSGHLVRLDTADEEYSRQLIITNSRWSLNFSQPLYLVLTSPLFLVFTFMLLLT
ALALREYMQRQLNALLKSWQKLESWANLSLIHGTTQAVPMDNISTETDAIILAIHQLQQR
IHENVASDISSDQSIRASALLDQETHIGNRAFFDNRLQAFIKGEDAQGAVLLIQFKEIEV
VQSLYGYQQAMSLLSTLIQVTKQRLEDHPSYFLARHSDYELSVLLPGVYIPEVKKFSDRL
LKNLQAVVTPIGINSDEFIHIGISYFSHEQAPYQIMSEADMALRSAQLQGPSQWFMFEAG
ELEEVKAQGSLKWRTLLSSAIANNGFVIFFQPIIACDNTKVLHHEVLSKVRDKKGNLISA
RVFLPMAKKCGLTVKMDLLILEQVCRVLAQEKKLQDDCSINVAIDSLLSNGFGEQFLAIV
NKFPGVAGRLMMEVSEYQLVNHLKELQPVIASLSAAGIRIVADKVGQYVVSAHYLNVYPI
YAMKLHSSIVIDIDKKTENQVFIQSLKTLAAPKNIAIYALGVEKQSEWRLLVQLGLKGGQ
GHFFTEPVAQVAKAIQLG
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcttatgctgtcaaagattaaaccgatacaacaaaccaaaaccaaagtattacttatg
acgtttttgttgttttattttctagtttgtacgttttctactttggctgtttatcaagta
caaaataatcaacatcatgccatagaggcctttaactttaatgaccagcaactggaaaat
tatgccaaggtgccgacgctttcaagcgggcatttggttcgcttagatactgctgatgaa
gaatactcaagacagttaatcattacgaacagtcgctggtctttaaacttttcacagcca
ctttatcttgtgcttacttcaccattatttttggtttttacctttatgcttttactcacc
gcattggcattacgtgaatatatgcagcggcagcttaatgctttgcttaaatcatggcaa
aaactagaaagttgggccaatctatcgctgattcacggcactactcaagctgttcctatg
gataatatatcgactgaaactgatgccattattttagctatccatcaacttcaacaacgt
attcatgaaaacgttgctagcgatatttcctcagatcaaagtattcgagctagcgctcta
cttgatcaagagacacatattggcaaccgtgcttttttcgataatcgtttacaagctttt
ataaaaggagaagatgcacaaggtgcggtactgctaattcagtttaaagaaattgaagtc
gtacaaagtttatatggctaccagcaagctatgtcacttttatcaacgcttatccaagtg
acaaagcaaaggctagaagaccacccaagctattttcttgctcgtcatagtgattatgaa
ttatcggtgttattgccgggtgtttatataccagaggttaagaagttttccgatcgctta
ttgaaaaacttacaagcggtggtaactcccattggaattaatagcgatgaatttattcat
atcggtattagctattttagccatgagcaagctccgtatcagatcatgtcagaagctgat
atggcattgcgctcagcgcagctacaagggccttctcagtggtttatgtttgaagcgggt
gagttagaagaggtgaaagcacaggggtcgttaaagtggcgtacattgctcagttcggca
atagcaaataacggttttgttattttcttccaaccgattattgcttgtgataataccaag
gttctacatcatgaagtattgtcaaaagttcgtgataaaaagggtaacctgatcagcgct
agagtttttttacctatggctaaaaaatgtggcttgactgttaaaatggatttgctgatc
ctagagcaagtgtgtcgagtgctagcccaggagaaaaaattacaagatgattgcagtatc
aatgtagcaatcgattcactattatcaaatggctttggcgagcagtttttagcgatagtg
aataagtttcctggagttgcgggtcgattaatgatggaagtgagcgaatatcaattagtt
aatcatctgaaagagttacagcctgttatcgctagtttaagcgcggccggtatcagaatt
gtcgcagataaagtcggacaatatgtggttagtgctcactatcttaatgtttatccaata
tatgcgatgaaattgcatagcagtattgtcatcgatattgataaaaaaactgaaaaccaa
gttttcattcaaagcttgaaaaccttagccgctccaaaaaatattgctatttatgcgctc
ggggttgaaaaacaaagtgagtggcgccttttagttcagcttggccttaaaggtggacaa
ggtcattttttcactgagccggtggcacaggtagcgaaggccattcagctgggttaa
DBGET
integrated database retrieval system
