Colwellia sp. Arc7-635: EKO29_19175
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Entry
EKO29_19175 CDS
T06022
Name
(GenBank) DUF3393 domain-containing protein
KO
K08306
peptidoglycan lytic transglycosylase C [EC:
4.2.2.29
]
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
EKO29_19175
Enzymes [BR:
cov01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
EKO29_19175
Peptidoglycan biosynthesis and degradation proteins [BR:
cov01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
EKO29_19175
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_4
Mltc_N
Motif
Other DBs
NCBI-ProteinID:
AZQ85930
LinkDB
All DBs
Position
complement(4469992..4471140)
Genome browser
AA seq
382 aa
AA seq
DB search
MKKRLTICLAIFSLLPPLSNAHDNEESLDFKQFVAQQDKEFSAYKKNIDKEFAQFVAAWQ
LAEDAYRAKISEKWQKPLLPGKKQWIDYSADLNQRTTVDFDSGAITVEIHQSLTPQQVTI
LAEKTITQLTNTSLSDTLAKDPIVQAVNKQLIDDNKQLAMPKISPTLLAKEYIGELATIS
SQREQNKTTITIPLKPNLLSDNAQRYYPFAQQQAQRWQIPASLILAIIHTESSFNPLARS
HIPAFGLMQIVPSSAGKDVTEFLNGKTTLLRPEYLYSAEQNIEAGSVYLHLLMSRYFKGV
KNSKNKLYMSIAGYNTGPGNVARALSNTTSLKRATQSANEQTSEQLYFQLIDNLPHQETV
NYLEKVLQRTSYYNNLLTKESI
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaacggctgacgatctgtctagctatttttagcttactaccgccattatcaaat
gctcatgataacgaagaatctttagattttaagcaatttgtagcacagcaagataaagaa
ttttctgcttataaaaaaaatatagataaagaatttgcccagtttgttgctgcatggcag
ttggctgaagatgcctatcgagcaaaaatatccgagaaatggcaaaagccattactacca
gggaaaaagcaatggatcgattattcagctgacttaaatcaacgcaccactgttgatttt
gattccggcgcaataacggttgagatacatcaatctttaacacctcagcaagtcacgatt
ttagctgaaaaaaccattacccaactcacgaatacatcgctatcagatactttggcgaaa
gaccctattgtacaggcagtaaataagcaattaattgatgataacaaacagctagcgatg
ccgaaaatctcaccaacattgttagctaaggaatatattggtgaattagcaacaatatcg
agtcaacgtgagcagaataaaactactatcaccattcctcttaaaccgaatctgctcagt
gataatgcacagcgttattacccttttgcccaacaacaagcacagaggtggcaaatacca
gcctctttaattctcgctattatccatacggaatcaagctttaatcctctcgctcgttct
catattccagcttttggtttaatgcagatagtaccgtcgagtgcaggcaaggatgttact
gaatttttaaatggtaaaaccacgctgcttagacctgagtatttatatagtgcagagcaa
aatattgaagcgggcagtgtctaccttcatttgttgatgtcacgctattttaaaggcgtt
aaaaatagtaaaaacaagctctatatgtcaattgcaggctacaacacgggtccaggtaat
gtcgctagagctctgagtaacactacatcattgaagcgggcaactcagtcagctaatgag
caaacctcggaacagttatattttcaattaatcgataacttgccacatcaggaaaccgtc
aactatttagagaaagttcttcaaagaacgtcttattacaataatttacttaccaaggaa
tcaatatga
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