Colwellia sp. Arc7-635: EKO29_19815
Help
Entry
EKO29_19815 CDS
T06022
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
cov
Colwellia sp. Arc7-635
Pathway
cov00300
Lysine biosynthesis
cov00470
D-Amino acid metabolism
cov01100
Metabolic pathways
cov01110
Biosynthesis of secondary metabolites
cov01120
Microbial metabolism in diverse environments
cov01230
Biosynthesis of amino acids
Module
cov_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EKO29_19815 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EKO29_19815 (lysA)
Enzymes [BR:
cov01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EKO29_19815 (lysA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
RsmF-B_ferredox
Motif
Other DBs
NCBI-ProteinID:
AZQ86044
UniProt:
A0A3S9QAP0
LinkDB
All DBs
Position
complement(4618963..4620213)
Genome browser
AA seq
416 aa
AA seq
DB search
MDFFNRKQHSLYAEQCPVTELAKEYGTPLYVYSRATIERHWHAFDQAAGERPHLVCYAVK
ANSNIAVLNVMARLGSGFDIVSKGELMRVIEAGGDPKKVVFSGVGKTSEEIAYALNLDIY
CFNVESSAELERIQSVAQALNKVAPISLRVNPDVDAGTHPYISTGLKENKFGISIEQAPE
LYQYATTLSHINIQGVDCHIGSQLTEVLPFLDALDRVLKLVDQLAEQGIKLSHIDVGGGL
GVCYDDEKPPHPNEYAKAIAEKLVGRDLKLIYEPGRAVMANAGILVTEVEYLKISEERNF
AIVDAAMNDLIRPALYQAWQAIIPVEQRDDVVSEQYDVVGPICETGDFLGKERMLAIRAG
DLLAVRSAGAYGFTMSSNYNSRPRAAEVMVDGDESYLIREREALSQLWQGESLLPL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
ttggactttttcaatcgtaaacaacactcattatatgccgaacaatgtcctgttactgag
ctagcaaaggaatatggtacacctttatatgtctattctcgggctaccattgaacgacat
tggcatgcttttgaccaagccgcaggagagcgacctcatcttgtttgttatgcggtgaaa
gccaatagtaacattgcggtattaaatgtcatggcccgacttggctctggttttgatatt
gtctctaaaggcgagttgatgcgagtgatcgaagccggtggcgatcctaaaaaagtcgta
ttttccggggttgggaaaacatctgaagagattgcttatgcgcttaatctcgatatttat
tgttttaatgttgaatcatctgctgaattagaacgtattcaatctgtggctcaagcgcta
aataaagttgcacccatttcattacgggttaaccctgatgttgatgccggcacacatcct
tatatttcaacgggtttaaaagaaaataagtttggtatcagtatcgagcaagctcctgag
ttatatcaatatgcgacaacgttatcgcatattaatattcagggggttgattgtcacatt
ggttcacagttaaccgaagtattaccttttttagatgcgcttgaccgagtattaaagcta
gtagatcaactagctgagcagggcattaagttatcccacattgatgttggcggtggttta
ggtgtttgttacgatgatgaaaaaccgccacaccctaatgagtatgcaaaagccattgca
gaaaaattagtcggtcgcgatctaaagcttatctatgaaccaggccgtgccgtaatggca
aatgccggtattttggttaccgaagttgaatatctaaaaattagtgaagaacgaaatttt
gctattgttgatgcggcaatgaatgatttgatcagaccagcgttataccaagcttggcaa
gcgatcattcctgttgaacaacgtgatgatgttgtcagcgagcaatatgatgtcgttggt
cctatttgtgaaaccggtgactttttgggtaaagaacgtatgcttgccatacgtgcgggt
gacttactcgcagtgcgcagtgctggtgcttatggttttaccatgagctctaattacaat
agtcgcccacgtgctgccgaagtgatggtcgacggtgatgaaagttatttgatcagagaa
cgcgaagctttaagccaattatggcaaggcgaaagcttattacctttatag
DBGET
integrated database retrieval system