KEGG   Colwellia sp. Arc7-635: EKO29_19905
Entry
EKO29_19905       CDS       T06022                                 
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
  KO
K03732  ATP-dependent RNA helicase RhlB [EC:5.6.2.7]
Organism
cov  Colwellia sp. Arc7-635
Pathway
cov03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:cov00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    EKO29_19905 (rhlB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:cov03019]
    EKO29_19905 (rhlB)
Enzymes [BR:cov01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     EKO29_19905 (rhlB)
Messenger RNA biogenesis [BR:cov03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Helicases
     EKO29_19905 (rhlB)
SSDB
Motif
Pfam: DEAD Helicase_C ResIII ERCC3_RAD25_C AAA_22 SecA_DEAD
Other DBs
NCBI-ProteinID: AZQ86057
LinkDB
Position
4639868..4641133
AA seq 421 aa
MKKTHLTEIKFSELKLEPTVVSGLETMGFEYCTEIQAKSLPILMTGKDIAGQAQTGEGKT
IAFLAATFHHLLQQKNVSHNQPRALIMAPTRELAIQIHRDAIEMAKSTGLRLGVVYGGEG
YESQRQELEQGVDILIGTCGRLLDYLKQGIYNLSNIEVVVLDEADRMFDLGFIKDIRYMF
GKMPAATERLSMLFSATLSFRVKELAFEHMNDPDSVEVAPDQKTNIRISEELFYPSNEDK
MALLQTLIEEDWPDKAIIFANTKHVCEKIHAHLEIDNIRVGMLTGDVIQKKRLKILEQFT
AGQLDVLVATDVAARGLHIPAVTHVFNYDLPDDCEDYVHRIGRTGRAGATGHAISLACEQ
YVFNLPAIETYIEHELPVSKYDHDALLTDLPRPKPRPRRHKPHNGGQNRSRNTSNRPQRS
N
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaaaaaaacacacttaacagaaataaagttctcggaacttaaactcgagcctaccgta
gttagcggcctcgaaactatgggctttgaatattgtactgaaattcaagcaaagtctctt
cctatactcatgacaggcaaagatattgccggtcaagcacaaactggcgaaggtaaaacc
attgcctttttagcagcaacatttcatcacttattacagcaaaaaaatgttagccacaat
caaccacgtgccttaatcatggcaccaacacgtgagcttgcaattcaaattcatcgcgat
gccattgaaatggcaaaaagtactgggttacgccttggtgttgtatatggtggtgaaggt
tacgaaagtcaacgtcaagagcttgaacaaggcgtagatattttgatcggcacttgtggt
cgtttacttgattacttgaagcaaggtatatataacctcagtaacatagaagttgttgtg
cttgatgaagctgatcgcatgtttgatttaggctttattaaagatattcgctatatgttc
ggcaaaatgccagccgcgactgaacgcttaagcatgctattttctgcaaccttatctttt
cgtgttaaagagctcgcttttgagcacatgaatgatcctgatagtgtcgaagtcgcaccc
gatcaaaaaactaacattcgaatttctgaagaattattttatccttcgaacgaagataaa
atggctttattacaaacattaattgaagaagattggcctgataaagcaattatttttgct
aatacaaaacatgtttgtgaaaaaattcatgcgcaccttgaaattgataacattcgtgta
ggtatgctcactggcgacgttattcaaaagaaacgtttgaaaattttagagcaatttacc
gctggccaacttgatgttttagttgccactgatgttgctgctcgtggtttacatattcct
gctgttactcatgttttcaactatgacttacctgacgactgtgaagattacgttcatcgt
atcggtcgtacaggtcgagccggtgctacaggtcatgcaattagtttagcttgtgagcaa
tatgtctttaacttgccagctattgagacctacattgagcatgaactacctgtcagtaag
tatgatcatgatgcactattgaccgatttacctagacctaaacctcgtccgcgtcgtcat
aaaccacataatggtggtcaaaaccgtagtcgtaatacaagtaataggcctcaaaggagc
aattag

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