Colwellia sp. Arc7-635: EKO29_19965
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Entry
EKO29_19965 CDS
T06022
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
cov
Colwellia sp. Arc7-635
Brite
KEGG Orthology (KO) [BR:
cov00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cov03021
]
EKO29_19965 (rpoH)
Transcription machinery [BR:
cov03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EKO29_19965 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
LysM3_NFP
UCR_14kD
HTH_25
2Fe-2S_thioredx
GntR
Motif
Other DBs
NCBI-ProteinID:
AZQ86068
UniProt:
A0A3S9QB54
LinkDB
All DBs
Position
complement(4655265..4656128)
Genome browser
AA seq
287 aa
AA seq
DB search
MSVSMQSMALTVPQSGSIEAYVQSAYSIPMLTAEKEQELATRLYSENDLKAAQELIMSHL
RFVIHVAKGYAGYGLPQADLIQEGNVGLMKAVKRFNPEVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKNKKRLGWFSNDEVNNVAEMLGVSTKDVLEMESRMSNQ
DQAFELSTDDDDNVGASTYSPAQYLEDKQSDLATEVEDSNWEQHANKRLSNALVSLDDRS
QDIIRTRWLHDDKSTLQELANKYEISAERVRQLEKNALSKLKGAMAT
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtatcaatgcaatcaatggcgttaactgttccacaaagtggcagtattgaggca
tacgtgcaatcagcgtatagcattccgatgctaacagctgaaaaagaacaagagttagca
actcgtttatattctgaaaatgatttaaaagcggcacaagaattaattatgtcgcatctt
cgttttgttattcatgttgctaaaggttatgccggatacggtttaccacaagctgattta
attcaggaaggtaacgttggcttgatgaaagctgttaagcgctttaaccctgaagtgggt
gtccgcttagtatcatttgctgttcattggatcaaagctgaaattcatgaatttgtgcta
aaaaactggcgtatcgttaaagttgcgaccactaaggcccaaagaaaattattcttcaat
ctacgtaaaaataaaaagcgtttaggttggtttagcaatgacgaagttaataacgttgct
gaaatgttaggtgtgagtactaaagatgtgttggaaatggaatctcgtatgagtaaccaa
gaccaagcttttgagttatcaacagatgatgatgataacgttggcgcatctacttattct
ccagcgcaatatctagaagataaacaatcagatcttgccactgaagtagaagattcaaac
tgggaacagcatgctaataaaagattaagcaatgctttagttagccttgacgatcgcagc
caagacattattcgtactcgttggttacatgacgataaatcgacattacaagagttagcg
aataaatacgaaatatcagcggaacgtgttcgacagctagaaaaaaatgccctttcaaag
ttaaaaggtgcaatggctacttag
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