Caldicellulosiruptor owensensis: Calow_0136
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Entry
Calow_0136 CDS
T01347
Name
(GenBank) ABC transporter related protein
KO
K18887
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
cow
Caldicellulosiruptor owensensis
Pathway
cow02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
Calow_0136
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
cow02000
]
Calow_0136
Transporters [BR:
cow02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
Calow_0136
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
DUF87
ABC_ATPase
RsgA_GTPase
MMR_HSR1
AAA_29
ATP-synt_ab
NTPase_1
FtsK_SpoIIIE
AAA_23
AAA_22
NB-ARC
AAA_16
Motif
Other DBs
NCBI-ProteinID:
ADQ03744
UniProt:
E4Q2B6
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All DBs
Position
172322..174550
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AA seq
742 aa
AA seq
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MKKVLRYVKPYILLVLAAVLFVFIQAMSELTLPDYMSKIVNVGIQQSGIEGAVPEAISSS
TMEKVLLFVSQDKKDDILNMYKLLTKSSDDYSSYLKKYPLLSKEDIYVLKTKDKDSIDRV
NVEMGKAILAAFGIEKMKKEAKGGIINFNGRQIPASIDLFAILKQLPQDQINQIQQEINK
KFSSLGNGMIVQAAAVAIKDEYKKIGIDIGKMQNAYIIKMGLLMLLLTLVSAISTILVAF
FAARVAAGVARDLRKDVFSKVESFSIEEFDKFSTASLITRTTNDIMQIQMLLVIGIRMIF
FAPVMGFGGVIKALSKSVSMSWIIALAVIVLLGLIMILYAIAMPKFMIMQKLIDKLNLVA
RENLSGIMVVRAFNAQKFEEQRFDEANRDLTKVGLFVNRAMAVLFPSMLFIMNGTTLLIV
WVGAHYIQNSSMQVGDMLAFMQYAIQIIFSFLMLSMLFILVPRAAVSAGRIEEVLSTEPS
IKNPEKPEKFREDMKGMVEFKNVFFKYPGAEEYVLENINFKVMPGQTVGIIGRTGSGKST
LVNLIMRFYDATEGQVLVNGVDVKNVKVEDLRAKIGYVPQKSWLFSGTIKSNLKIGNDFA
TDEDLKQAAEIAQALEFIEEKPQKFDTEIAQGGTNVSGGQKQRLSIARALVKNPDIYIFD
ESFSALDFRTELKLRRALKEKLKDKTVIIVSQRIATLIHADQIIVLEDGKIAGIGRHEEL
LKTCETYREIALSQLPEEELLA
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaagtgttaagatatgtaaaaccttatattctgcttgtcttagcagcagttttg
tttgtgtttattcaagcaatgagtgaacttacgctgccagattatatgtcaaagatagta
aatgtaggtattcagcaaagtggtatagaaggtgcagtgccagaagctatatcaagttca
actatggaaaaagtgcttttgtttgtgtcacaagacaaaaaagatgacattttgaacatg
tataagcttttaacaaaaagttctgatgattacagtagctatcttaaaaaatatcctctt
ttatccaaagaagatatttatgtattaaagacaaaggacaaggacagcatagacagggtt
aatgttgagatgggtaaagctattttagctgcttttggaattgaaaagatgaaaaaagaa
gcaaaaggcgggattataaactttaatggcagacagataccagcaagtattgaccttttt
gctattttaaaacagttaccacaggaccagataaatcaaattcagcaagaaataaacaaa
aagttttcatcgcttggcaacggtatgatagttcaggcagcagctgtagcgataaaggat
gaatataagaaaattggaattgatataggtaagatgcagaacgcgtatattataaaaatg
gggcttttgatgcttcttttaactttagtttcagcaatctctactattctggttgctttc
tttgctgcaagagtggcagctggtgttgcaagagatttgagaaaagatgtattttccaag
gttgaaagtttttcaattgaagagtttgataagttttcaacagcatcactcattacaaga
acgacaaacgatatcatgcagattcaaatgcttcttgtgattggaataaggatgatattc
tttgcacctgtaatgggatttggtggtgtaatcaaagcactttcaaaaagcgtttcaatg
tcgtggataattgctcttgctgtaattgttcttctggggcttatcatgattttatatgcc
attgcaatgccaaagtttatgattatgcaaaaactaatagataagttaaaccttgtagca
agagagaatctgtctggtatcatggttgtgcgggcatttaatgcacaaaagtttgaagaa
caaaggtttgatgaggcaaatagggatttgaccaaagtaggtctttttgtaaacagagca
atggcagtgctttttccttcaatgttgtttattatgaatggtacaacccttttgattgta
tgggtaggtgctcactatattcaaaattcaagtatgcaggttggagacatgcttgcattt
atgcagtatgctatacagataatcttttcattcttgatgctttcaatgctatttatactt
gttccaagagctgctgtttcagcaggacgtattgaagaggtactttcaacagaaccttca
atcaaaaatccagaaaagccggagaagttcagagaagatatgaaaggaatggtagagttt
aagaacgtgttcttcaaatatcccggtgctgaagaatatgttcttgaaaatataaacttc
aaagttatgccgggtcagacggttggtataattggaagaacaggaagtggaaagagcact
cttgtgaaccttattatgagattttatgatgctacggaaggtcaagttctggtaaacggg
gttgatgttaaaaatgtaaaggttgaggatttgagagcaaagatagggtatgttccgcaa
aagagctggctttttagcggtaccatcaaatcaaatctcaagattggcaacgattttgca
acagatgaagatttgaagcaggcagcagagattgctcaggcacttgagtttatagaggaa
aaaccacaaaagttcgatactgaaattgcgcagggcggaactaatgtttcgggaggacag
aaacaaagactttcaattgcgagggcgcttgtaaaaaatccggatatttatatattcgat
gaaagcttttcggctcttgactttagaactgaacttaagctaagaagagctttgaaagaa
aagcttaaagataagacggtaataatagtatctcaaagaattgcaaccttgattcatgca
gaccagataatagtacttgaagatggcaagattgctggtattggcaggcatgaagaactt
ttaaaaacctgtgaaacttatcgtgaaattgctctttcacaacttccagaggaggaactt
ttggcatga
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