Caldicellulosiruptor owensensis: Calow_0871
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Entry
Calow_0871 CDS
T01347
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
cow
Caldicellulosiruptor owensensis
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cow03016
]
Calow_0871
Enzymes [BR:
cow01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Calow_0871
Transfer RNA biogenesis [BR:
cow03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Calow_0871
Prokaryotic type
Calow_0871
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
SoFic-like_C
DKCLD
Motif
Other DBs
NCBI-ProteinID:
ADQ04439
UniProt:
E4Q6E0
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Position
959752..960624
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AA seq
290 aa
AA seq
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MNGVLLVDKPVGITSHDVVEFVRKEFNVKAGHTGTLDPFATGLLVILIGEATKLSSFFTS
QEKTYIATMQFGIRTDTLDITGKIKEKNMIIVEEKEIEECFKILKGEIELNVPIFSAKKL
NGRKLYEYARKGINIEIPKMKSIIYSIEIINFSYPYLEFKVQCSHGTYIRSLAEKIAENL
STVGLLSELRRTRSGFFDLKDAVTLSNIRAESIIPVCRLFKNEIKVGRKTYKKILNGNPL
VNQDIEDIIDIDTEFADFYKICVDESVFIYKREKDVFKYILKVETTDECL
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagttttgcttgttgacaagccagtaggaattacctcgcatgatgttgttgaa
tttgtcagaaaagagttcaacgtgaaagctgggcatacaggaacgctcgacccgtttgca
acaggacttttggtcattttgattggggaggctacaaagctttcttctttctttacaagc
caggagaaaacatatatagcaacaatgcagtttggcataaggaccgacacgcttgatata
actggtaaaataaaagagaagaatatgataattgttgaagaaaaagagatagaggaatgc
tttaaaattttaaaaggagaaatcgaacttaatgttccaattttttctgcaaagaaactc
aatggcagaaaactctacgagtatgcacggaaaggaataaatattgaaattccaaagatg
aagagtatcatatatagtatagagataatcaacttttcctatccgtatcttgaatttaaa
gttcagtgcagccatggaacgtatataagaagtttggcggaaaaaatcgcagaaaatctt
tctactgtgggtctgctttctgaactaagaaggacaagaagcggtttttttgatttgaaa
gatgcagttactttgagcaatatcagggcagaaagcataattcctgtatgtagactattt
aaaaatgagataaaagtaggcagaaaaacatataagaagattttaaatgggaatccactc
gtaaaccaggacatagaagatattatagatatagacactgaatttgcagacttttataaa
atttgtgttgatgagtctgtctttatctacaaaagagaaaaggatgtattcaaatatatt
ttaaaggtggaaactacagatgaatgtttatga
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