Caldicellulosiruptor owensensis: Calow_0954
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Entry
Calow_0954 CDS
T01347
Name
(GenBank) nuclease SbcCD, D subunit
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cow
Caldicellulosiruptor owensensis
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cow03400
]
Calow_0954
DNA repair and recombination proteins [BR:
cow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calow_0954
Archaeal homologous recombinant proteins
Calow_0954
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Motif
Pfam:
Metallophos
Metallophos_2
DUF5984
Motif
Other DBs
NCBI-ProteinID:
ADQ04520
UniProt:
E4Q6T7
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All DBs
Position
1043087..1044349
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AA seq
420 aa
AA seq
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MAIRGVHTADLHFGVTTYSRETPDGLGSRVHDFFKTFDRILEFIRENSIDLLLITGDIFK
DREPNSTLRNMFYKRVVDISKGGVLVAIVPGNHDMHPFETKDHSVKVFEIFDQPNIVVMD
RPFETREFEIRGEKLRIVAVPYLYLERFVDETFPQKTEEIDMIAANFFEKKLSQVLDSSE
DNIPTILAGHFTVVEAQIGSERSIMLGKDIKVPLSCLLNPKLKFVALGHIHKPQILHAAN
PTVLYCGSPDRIDFSEANDSKGFVVFEIDKDDFRFEFQPVKVRPFCQLEIDVFEDEVENL
TKKLLDKIEEKIQVFEQNTSNSIQVSVVKLIIKTQSLIKEKIDVGLVERFLRDRCFVLAP
IEIEVVDSKKDFRIAEVDEKSDPVDAFEKFLSASQKYRGIENKDKVVSEFKKLLYEVQEK
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atggcaataagaggagttcatacagctgatcttcattttggtgtaacaacttacagccgc
gaaaccccggatgggcttggctcacgtgtacatgattttttcaaaacatttgacaggata
ctggagtttatacgagaaaacagtattgatcttttgcttataacaggcgatatttttaaa
gacagagaaccaaactctacgctgaggaatatgttttacaagagggttgtggatatttca
aaaggaggcgttttggtggcaatagtgccaggcaatcatgatatgcatccgtttgagaca
aaagatcattctgtgaaggtttttgaaatattcgaccagccaaacattgttgtgatggac
agaccttttgaaaccagagaatttgaaataagaggtgaaaagcttcgcattgtggctgtg
ccatacctttatcttgaaaggtttgtggatgagacatttcctcaaaagacagaagagatt
gatatgatagcagccaatttttttgagaaaaaactaagccaggttttggactcttcagaa
gataatattcctacaattcttgcaggacattttactgtagtagaggcgcagattggcagt
gaaagatcaattatgcttggcaaagacataaaagtgcctctttcttgccttttaaatcca
aagttaaaatttgttgcgctgggtcacattcataaacctcaaattttgcatgcagcaaac
cctactgtgttgtattgtggctcgcctgacaggatagatttttctgaagcaaacgacagc
aaggggtttgttgtgtttgagatagacaaagatgattttaggtttgagtttcaaccagtt
aaggtaagacctttttgccagttggagattgatgtgtttgaagacgaagtagaaaatctc
accaaaaagcttcttgacaaaatagaagagaaaatacaagtgtttgagcaaaatacttca
aatagtattcaggtgtcggttgtaaagctcataataaaaactcaaagtttgataaaagaa
aagattgatgttggacttgttgaaaggtttttgagagacagatgttttgttttagcgcct
atcgaaattgaggtagttgactcaaagaaagattttagaattgctgaggttgatgaaaag
tcagaccctgttgatgcatttgaaaagtttttatcagcaagccagaaatacaggggtata
gagaataaagataaggttgtatcagaatttaaaaagcttttgtatgaagttcaggaaaaa
tga
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