Caldicellulosiruptor owensensis: Calow_0955
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Entry
Calow_0955 CDS
T01347
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
cow
Caldicellulosiruptor owensensis
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cow03400
]
Calow_0955
DNA repair and recombination proteins [BR:
cow03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Calow_0955
Archaeal homologous recombinant proteins
Calow_0955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
AAA_15
SbcC_Walker_B
SMC_N
GAS
AAA_29
AAA_27
AAA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADQ04521
UniProt:
E4Q6T8
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All DBs
Position
1044377..1046950
Genome browser
AA seq
857 aa
AA seq
DB search
MRPLFLRVENFKSYKDTQNEIDFSNIKVACIIGKNGNGKSSIAEAIAWALFGEFERLQTG
KRGKVAETEYINSHRDYMQVEFEFELNKTIYKVVRRLDRKGKKYLSLFVKKGDSLIPINE
ATYTQTQVKLQNILGIDFNVFLHSAYLSQKRTEDFLLSSPEDRREVLAKILNLSVYDRIN
ELAKEKRKEIKVLLDIKNREIDEENKILSEEESIKSLVADLEKKRITIEAELNGLRNRLN
AFISQRSEIEQKLDILNQKKNEMIELQRKADEIRYKFDAARKELLKIEEKLKEEDKITAM
VKEYEMIKEKVELKRKDYEKYLELKNKMVLCERDIKNKIDQKKIFEKNIEESNLQLNKET
SEISKYEEEMKKVEVEISKVENELGKVKQYKQEQEKKREEIVKHEKLLEVVENKLKELAS
SYRLIEANQGRCPVCLRQINGQEEKEHIKNEIAAQGKEFKQRRDSLTKKLEILRKEFSEL
EEKIKNEEILRTREKKLHGMLENLKAKIDQKTQNISNLQNSIVQVTQSIKFCEEEIERLK
EEMTYLKREISILSFDENYYTQLLQREKELEIYQRLFSELTVNKVKAENLKKGILEYQEQ
EKEILKKVEDLKHEIANLSTFAHAVMLEKVKSDILTCESKIKNLQESLNSVLKELGILEQ
KLNQIEEAKEKLSRLESEIEEMKKKIEIYDIIIDITGPDGIKNEIIANTLPQIRDEANKF
LKILTNGAFSIDFKTQRETTSGKTIETLQIEISDASGTRNYELFSGGELFRINFAIRIAL
SKVLLKRSGASIRMLILDEGFGSQDEEGKDHIVECLNRIKDQFDTILVITHIEDLMDAFD
QKIIVKKDMEGSKIFVV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
ttgagacctctttttttgagggttgaaaatttcaaatcatacaaggatactcagaacgag
attgattttagcaatataaaagtagcttgtataataggtaaaaacggcaatggaaaatct
tctattgcagaggcaattgcctgggcactttttggcgagtttgaaagacttcaaacagga
aaacgaggaaaagttgcagaaacagagtatataaactcacatagggattatatgcaggtt
gaatttgaatttgagttgaataagaccatatataaagttgtgagaagacttgacaggaaa
ggaaaaaagtatctttcactctttgttaaaaaaggagacagtcttatacctataaatgaa
gcaacttacacccagactcaagtaaagcttcagaatattttgggaatagattttaacgtc
tttttgcactcagcatatctttctcaaaaacgaacagaagattttttgctgtcatcccct
gaagacaggcgtgaagttcttgcgaagatattgaacttgagtgtttatgacaggataaac
gagcttgcgaaagaaaaacgaaaagaaataaaggttttgctggatataaagaacagagaa
atagacgaagaaaataagattttgtcagaggaagagtctataaaatctttagtggctgat
ttggaaaagaagagaatcacaatagaagctgaattaaacggtttgagaaatagactaaat
gcctttatttcgcagaggtctgaaatagaacaaaaacttgatatattaaatcagaaaaag
aatgaaatgatagaacttcaaagaaaagctgatgagataaggtataagtttgatgctgcg
agaaaagagcttttaaaaattgaagaaaagttaaaggaagaagataagataactgcaatg
gttaaagagtacgagatgataaaagaaaaggttgaacttaagagaaaggattatgaaaag
tatcttgagctcaaaaacaaaatggttttatgtgaaagggatataaaaaacaaaatagat
cagaaaaagatatttgaaaaaaatattgaagagagtaatttacagctgaataaagaaact
tctgagatttcaaagtatgaggaagagatgaaaaaagtggaggtagaaatttcgaaggtc
gaaaatgagctgggaaaagtaaagcagtataaacaggaacaagagaaaaaaagagaggaa
atagtaaaacatgaaaaattgttggaggtagtggagaacaaattaaaagaacttgcttca
agttacagacttatagaggcaaatcagggaaggtgcccagtatgcttgcgtcaaattaat
ggtcaggaagaaaaagaacatataaaaaatgaaattgcagcccagggaaaagaatttaaa
caaagaagagatagtttgaccaaaaaacttgaaattctgagaaaagagttttctgagctt
gaagaaaagataaaaaatgaagaaattctgaggacaagagaaaagaagcttcacggaatg
ttagaaaatcttaaggctaagatagaccaaaaaacacaaaatatttcaaatttacaaaat
tcaatagttcaggtaacccaaagcataaagttttgtgaagaagaaatagaaaggttaaaa
gaagagatgacatacctaaaaagagaaatttccattttgagttttgatgagaattactac
acccagcttttgcaaagagaaaaagaacttgaaatatatcagagactttttagcgagctt
actgtgaacaaggtgaaagctgagaatttaaaaaaggggatacttgagtatcaagaacag
gaaaaagagattttgaaaaaggttgaggatttaaagcatgagatagcaaatttatctact
tttgcgcatgctgtgatgcttgaaaaggtaaagtcagatattctgacctgtgaaagtaag
ataaaaaatcttcaagaaagtctcaattctgttttaaaagaattgggaatccttgagcag
aaactaaatcagattgaagaggcaaaagagaagctctcaaggcttgaaagtgaaatagaa
gagatgaaaaaaaagattgaaatatacgatataataatagatatcaccgggcctgatgga
ataaaaaacgagataattgcaaatacattaccgcaaataagagatgaggcaaacaaattt
ttaaagatcctgacaaatggagcattttcaatagactttaaaactcaaagagaaacaaca
tctggcaaaacaatagagacccttcaaatagagatctctgatgcaagtgggacaagaaac
tatgaacttttttcaggtggtgagcttttcaggataaattttgcgataagaatagctctt
tcaaaagttttgcttaaaagatcgggtgcttccataagaatgctgattttagacgaagga
tttggttctcaggatgaagagggtaaagaccacattgtcgagtgtctgaatagaatcaaa
gaccagtttgacactatacttgttataacacacattgaagatttaatggatgcctttgac
cagaagattattgttaaaaaagatatggaaggttctaaaatttttgttgtataa
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