Caldicellulosiruptor owensensis: Calow_1011
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Entry
Calow_1011 CDS
T01347
Name
(GenBank) RNA-binding S4 domain protein
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
cow
Caldicellulosiruptor owensensis
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cow03009
]
Calow_1011
Enzymes [BR:
cow01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
Calow_1011
Ribosome biogenesis [BR:
cow03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
Calow_1011
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
S4_2
Motif
Other DBs
NCBI-ProteinID:
ADQ04574
UniProt:
E4Q6Z1
LinkDB
All DBs
Position
1096956..1097657
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AA seq
233 aa
AA seq
DB search
MRLDKFLTHCGFGSRTQVKKLIREGIVTVNGKQIVEVDFKINPEEDVVEVDGRIVKFSRW
IYIMMNKPKGYVCSNEDPMSLTVFSLISDDLKHRDLHTVGRLDKDAEGLLIITDDGEYTH
RVISPKKRIEKEYLVRLEKEVDEERLKEFENGIILDDGYKTLPAKYTIIDSTTVKLCIYE
GKYHQVKRMFEAIGNKVVDLKRRRIGGLNLDESLKPGEYRLMKEEEAYLVFGK
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgagacttgacaagtttctgacccactgcggttttggttcacggactcaagttaaaaaa
ctaataagagaaggaattgtgactgtaaatggaaaacaaatagtagaagttgattttaag
attaatcccgaagaagatgtagtagaagtcgatggcaggattgtaaagttcagtagatgg
atttatatcatgatgaacaaaccgaaaggttatgtgtgttcaaatgaggacccgatgtca
cttacagtgttctctctcatttctgatgatttaaagcatcgagatttgcatacagttgga
aggcttgacaaagatgcagaaggtcttttgataattacagatgatggtgaatatacgcac
agagttatctcacccaaaaaaagaattgaaaaagagtatttagtgaggcttgaaaaagaa
gtggatgaggaaagattaaaagagtttgaaaatggtattattttagatgatggttataag
acacttcctgcaaaatatactattattgatagtaccacagtcaaattgtgtatatatgaa
ggtaaatatcatcaggttaaaagaatgttcgaagcaattggaaataaggtggtggactta
aaacgccggagaataggaggtcttaatttagacgaaagtttaaaaccaggtgaatacaga
ttgatgaaagaagaagaggcttatttggtgtttggtaagtaa
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