Caldicellulosiruptor owensensis: Calow_1073
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Entry
Calow_1073 CDS
T01347
Name
(GenBank) RNA modification enzyme, MiaB family
KO
K18707
threonylcarbamoyladenosine tRNA methylthiotransferase MtaB [EC:
2.8.4.5
]
Organism
cow
Caldicellulosiruptor owensensis
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cow03016
]
Calow_1073
Enzymes [BR:
cow01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
Calow_1073
Transfer RNA biogenesis [BR:
cow03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
Calow_1073
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GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
B12-binding
TatD_DNase
UPF0180
SBP_bac_3
DUF2024
Motif
Other DBs
NCBI-ProteinID:
ADQ04636
UniProt:
E4Q177
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All DBs
Position
1157903..1159207
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AA seq
434 aa
AA seq
DB search
MKIAFYTLGCKVNQYETQAVAELFKESGFEIVDFDSKADVYVINTCTVTNMSDRKSRQAI
KKAKKLSPESIVVVMGCYPQVYPHEVEKIRDIDIIIGTKDRQKIVDYVKEYLENKKKIVA
IDEGYKRGTFEELKISEFNERSRAFIKIEEGCDQFCSYCIIPYARGAVRSRSLESIEEEV
RRLVSNGYKEFVITGINISAYGKDLDGKITLIDVIERINEIEGVKRIRLSSLEPLIMSEQ
FISRLLSFDKLCHHLHLSLQSGSDKILKFMNRHYTTAQYQDIVDRIKEKWDDVAFTTDII
VGFPGETEEDFNATLEFVQKIGFSRIHVFRFSPKKGTKAYDMPNQVDSKEKERRSKVMKE
VAANLSYQFHRKFVGKWLEVLIEQDSDFDGYYEGYSGNYIRTVVRKNHFIVPGEIYKVKI
TQAYEQYVKGEIIQ
NT seq
1305 nt
NT seq
+upstream
nt +downstream
nt
ttgaagattgccttttatacacttggatgtaaggtgaaccagtatgaaacccaagcagta
gctgaactttttaaagaaagcgggtttgaaattgtcgactttgacagcaaggcagacgtg
tacgtgataaatacatgtacagttactaatatgagtgatagaaagtcaaggcaggcaata
aaaaaggctaaaaaactttctccggaaagtatcgtagttgtaatgggatgctatcctcaa
gtgtatccacatgaggttgagaaaataagagatatagacattataattggaactaaagat
agacaaaaaattgttgattatgttaaagaatatttagagaacaaaaagaaaattgtagca
atagatgaaggatataaaaggggaacatttgaagagctcaagatatcggaatttaatgag
cgcagccgagctttcataaagatagaagaaggttgtgatcagttttgttcttattgtata
attccatatgcaaggggggcagttagaagcagaagtttagagagcattgaagaggaagtt
agaagacttgtttcaaatggatataaagaatttgtcataacaggaattaacatctcagct
tatgggaaggatttagacgggaagataaccttgatagatgtgattgagagaataaatgag
attgaaggggtcaagaggattaggctaagttctcttgaaccacttatcatgagcgaacag
tttataagtaggctattgagttttgataagctgtgccatcatttgcatctttcccttcaa
agtggcagtgacaaaatattgaaatttatgaacaggcattacactacagcacagtaccaa
gatatagtagacagaataaaagaaaaatgggatgatgtagcattcaccactgatattata
gtgggttttccgggcgaaacagaggaagatttcaatgctactttggaatttgttcagaag
ataggtttttcacgaattcatgtttttagattttcgccaaaaaaaggtactaaagcctat
gatatgccaaatcaagtagatagcaaagaaaaagaacggcgaagcaaagtaatgaaagaa
gtggcagcgaacctttcatatcaatttcacagaaagtttgttggcaagtggttagaggtt
ttaattgaacaagattctgattttgatggatattacgaagggtattcaggaaattatatc
cgtacggtagtaaggaaaaatcattttatagtacctggtgaaatttacaaggttaagatt
acacaggcttatgaacaatatgtcaaaggagaaataatccaataa
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