Caldicellulosiruptor owensensis: Calow_1220
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Entry
Calow_1220 CDS
T01347
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
cow
Caldicellulosiruptor owensensis
Pathway
cow03030
DNA replication
cow03410
Base excision repair
cow03420
Nucleotide excision repair
cow03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Calow_1220
03410 Base excision repair
Calow_1220
03420 Nucleotide excision repair
Calow_1220
03440 Homologous recombination
Calow_1220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cow03032
]
Calow_1220
03400 DNA repair and recombination proteins [BR:
cow03400
]
Calow_1220
Enzymes [BR:
cow01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Calow_1220
DNA replication proteins [BR:
cow03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Calow_1220
DNA repair and recombination proteins [BR:
cow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Calow_1220
NER (nucleotide excision repair)
GGR (global genome repair) factors
Calow_1220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DUF7201
CABIT
Motif
Other DBs
NCBI-ProteinID:
ADQ04778
UniProt:
E4Q1P4
LinkDB
All DBs
Position
complement(1304234..1306786)
Genome browser
AA seq
850 aa
AA seq
DB search
MKLVIFDGNSILYRAFFALPELTTSSNIPTNAIYGFINVILKYLEQESPDYVAVAFDKKG
RQARKSEYEEYKANRKPMPDNLQVQIPYVREILYALNIPIIEFEGYEADDVIGSLVNMFK
NIDLDIVIITGDKDTLQLLDKNVVVKIVSTKFDKTTEDLYTAENVKEKYGVWANQVPDYK
ALVGDQSDNIPGVKGIGAKSAQKLLKEYSSLEEIYQNLDKIKGSIREKLETGKDMAFLSK
RLATIVCDLPLNVKLEDLRTKEWNKEKLYEILVQLEFKSIIKRLGLSEEVQFEFVQQLTN
IHDVEQKKLESISQIRSKDISLMFVPEEKCFYLYDKESNTVFVTRERHLIEEILKSESVK
IVYDLKNMFHELYLENTDNIRNCEDVMIASYVLDSTRSSYELETLFMSYLNTDLEAVKKD
KKVTSVILLERLWDELSSLIDLNSCQFVYTNIERPLIPILYEMEKAGFKVDRDALLQYTK
EIESKILNLEKQIYQIAGEWFNINSPKQLSYILFEKLKLPVIKKTKTGYSTDAEVLEELF
DKHEIVPLILDYRMYTKILTTYCQGLLQAINPSSGRVHTTFIQTGTATGRLASSDPNLQN
IPVKYDEGRLIRKVFIPEEGHVLIDADYSQIELRILAHISEDERLINAFKNNVDIHSQTA
AEIFGVDIDDVTPEMRSQAKAVNFGIVYGISDYGLARDIKISRKEAAEFINRYFERYPKV
KEYLDNIVKFARENGYVLTLFNRKRYIKDINSTNRNTRSYAERIAMNSPIQGSAADIMKL
AMIKVYQKLKENNLKAKIILQVHDELLIEAPYEEKDIVKRIVKTEMENAVALKVPLVVEV
KEGLNWYETK
NT seq
2553 nt
NT seq
+upstream
nt +downstream
nt
atgaaattagttatatttgatggtaacagtattttatatagagctttttttgctcttcct
gaactgacaacttcaagtaatattccgacaaatgctatttatgggtttataaatgtaata
ttaaaatatttagaacaagagagccccgattatgttgcagttgcatttgataagaaagga
agacaggcacgaaaaagcgagtatgaagaatacaaagctaacagaaaacctatgccagat
aatcttcaagtacaaattccttatgttagggagattctttatgctcttaatattccaatt
attgagtttgaaggttatgaagcagatgatgtaattgggtcgcttgtaaacatgttcaaa
aatattgatttagatattgttattataactggtgataaggatactcttcagttgttagat
aaaaacgtagttgtgaagattgtttcaacaaaatttgataaaacaacagaagatttatat
actgcagagaatgtaaaagagaaatatggagtttgggcaaatcaggtaccggattataaa
gcgcttgttggagatcaatcagataacattccaggggtaaaaggaattggggcaaagagt
gctcaaaaacttttgaaggaatactcatctttggaagaaatataccaaaatttagataaa
attaaaggttctatccgcgaaaaattagaaacaggcaaagacatggcatttttatccaag
cgcttggcaacaattgtatgtgatttaccactaaatgttaaacttgaagacttaagaaca
aaagagtggaacaaggaaaaactatatgagattttagtccaattagagttcaagagtata
ataaaacggttggggctgtcagaagaggttcaatttgagtttgttcaacagctaactaat
attcacgatgtagagcaaaaaaagcttgagagcatatcacagataagatcaaaagatatc
tcattaatgtttgtgccagaagaaaaatgtttttatttatacgacaaagaaagtaatact
gtgtttgtaacaagagaaagacatttaatagaggagattttaaaaagtgaatctgtaaaa
attgtatatgatttaaaaaatatgtttcatgaactctacttagaaaacacagataatatt
agaaattgtgaggatgtaatgattgcttcctatgttcttgacagcacaagaagttcatat
gaattggaaacgttgtttatgtcctacttaaacaccgacttggaagctgtgaaaaaggat
aaaaaagtgacatcggtaatccttttggaacgattatgggacgagctttcaagcttaatc
gatttaaattcgtgccagtttgtgtatacaaatatagaacgtcctcttattccaattcta
tacgagatggaaaaagcaggatttaaggtagacagagatgccctgcttcagtatactaag
gagattgaaagcaaaatattaaatcttgagaagcagatatatcaaattgcaggtgagtgg
tttaatataaattcacccaaacaactttcttacattttgtttgagaaactaaaacttcct
gtaataaaaaagacaaaaacaggatattccactgatgctgaggttttagaagagcttttt
gacaaacatgagatagttcctcttattttggattacaggatgtataccaagatactaaca
acctattgtcaaggattactccaggcaataaatccttcttcaggcagagtccatacaaca
tttatccaaacaggaacagcaacaggaagacttgcaagtagtgatcctaatttacaaaat
atacctgtaaaatacgatgaaggaagattaataagaaaagtttttatacctgaagaaggg
catgtactgattgatgcagattattcccaaattgaacttagaatacttgcccatatttct
gaagatgagagacttataaatgcctttaaaaataacgttgacatccattcgcagacagca
gctgagatttttggtgtagatatagacgatgttaccccagagatgagaagtcaagctaaa
gcagtaaattttggtatcgtttatggaatttctgattatggacttgcaagggatattaag
atttccaggaaagaggctgcagagtttataaataggtattttgaacgttatcctaaagtt
aaggagtatttggacaatattgttaaatttgctcgtgaaaatggatatgttttgacttta
tttaatagaaaaagatatataaaggacataaactctacaaacagaaatacaagaagttat
gcagaaaggattgcgatgaactcgccgattcagggcagcgctgctgatattatgaaattg
gcaatgattaaagtgtatcaaaagcttaaggaaaataatcttaaagccaaaataatatta
caggtgcatgatgagcttttaatagaagctccatacgaagaaaaggatatagtaaaaaga
atagtaaaaaccgaaatggaaaatgcagtagctttaaaagtgcctctggtggttgaggtg
aaagaaggactgaactggtatgagacaaaataa
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