Caldicellulosiruptor owensensis: Calow_1582
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Entry
Calow_1582 CDS
T01347
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
cow
Caldicellulosiruptor owensensis
Pathway
cow03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Calow_1582
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cow03400
]
Calow_1582
Enzymes [BR:
cow01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Calow_1582
DNA repair and recombination proteins [BR:
cow03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Calow_1582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
ADQ05128
UniProt:
E4Q3P8
LinkDB
All DBs
Position
1649982..1650539
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AA seq
185 aa
AA seq
DB search
MLTWEELENACISCEKCPISKNRTNVVVGDGNKNAKLVFVGEAPGEEEDKQGKPFVGRAG
KFLDLALTSLELSREKDFYICNILKCRPPNNRVPTEAEAQNCLPFLRAQIKLISPKIIVC
LGATAMKYILGKDLKITQDRGKWFEKGGFWIMATYHPAALLRDPGKREDFYRDLKSVKQK
LEKLI
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atgctgacatgggaagagcttgaaaatgcatgtatttcatgtgaaaaatgccctatttct
aaaaatcgcacaaacgttgtggtgggtgatggaaataaaaacgcaaagcttgtatttgtg
ggtgaagcacctggtgaagaagaagacaagcaaggaaaaccgtttgtaggaagagcagga
aagtttttagatttagctttgacctctttagaactttcaagagaaaaagatttttatatc
tgcaatattttaaagtgcagacccccaaataaccgtgttccaacagaagcagaagctcaa
aactgcttgccttttttgagagcccagataaaacttatctctccaaaaataattgtgtgc
cttggtgcaacagctatgaaatatattcttggtaaagacctcaaaattactcaagacaga
ggaaagtggtttgaaaaaggtggtttttggattatggctacataccatccagcagcactt
ttaagggacccgggcaagagagaggatttttacagggatttgaaaagtgttaagcaaaag
ttagaaaaattgatataa
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