Caldicellulosiruptor owensensis: Calow_1819
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Entry
Calow_1819 CDS
T01347
Name
(GenBank) ribonuclease, Rne/Rng family
KO
K08301
ribonuclease G [EC:3.1.26.-]
Organism
cow
Caldicellulosiruptor owensensis
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cow03019
]
Calow_1819
03009 Ribosome biogenesis [BR:
cow03009
]
Calow_1819
Messenger RNA biogenesis [BR:
cow03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
Calow_1819
Ribosome biogenesis [BR:
cow03009
]
Prokaryotic type
rRNA processing factors
Calow_1819
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Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
TRAM
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
ADQ05348
UniProt:
E4Q4Y8
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Position
complement(1918821..1920536)
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AA seq
571 aa
AA seq
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MQSEIIVDVSFNQTRVAVLEDKELVEIYIEREDSQSIVGNIYKGVVENILPGMDAAFVNI
GREKNAFLYLGDVNRLEFGDTDEYYEIKTNPLALRCGQEIVVQVIKEAYDQKGPRVTTNI
TLPGRYLVLLPNTEYVGVSKRIESEEERLRLKEIACRLKPEGMGLIVRTAAEGKSEEILK
SELEFLKNMWKKIRQKSCQSAPVLLYKDYDLVFKAVRDMFTNQVDRFVINDRKKYNKIIE
FLSSYAPSLKSKVEYFNLATNIFEYFQIEQKLAKALSKRVWLKSGGYIVIDETEALTVID
VNTGKYVGKTDVAETILKTNLEAAQEIARQLRLRDIGGIIIIDFIDMKNPEHQKIVLDAL
KEALKRDKTKTVVVDITPLGLVEMTRKKVRQRLSCVMQSSCPYCEGTGKILSPESVAFKV
LKEIEWYCKNKVEDKFFVEMNTKVCEILRKGEIDRIKELEQKYKKKIYVKASSNIHINKF
TICPVKDEDHYMALCGWLCEGDEVLAFVEEEDRFNPKNAIGYVNQNKIEFDNASDLIGKY
IYAKVEKVYGTLSKGKILDVYEVDKEDVKEF
NT seq
1716 nt
NT seq
+upstream
nt +downstream
nt
atgcaaagtgaaattatagtagatgtgagttttaatcaaaccagggttgctgttttggaa
gataaggagcttgttgagatttacatcgaaagggaagacagccaaagtatagtagggaat
atctataaaggtgttgttgaaaacatcctgcctggcatggatgcagcatttgtcaatatt
ggtcgggagaaaaacgcttttttgtaccttggagatgtgaacaggcttgagtttggggat
actgatgagtattatgagataaagacaaacccgcttgccttaaggtgtggtcaggagata
gttgtgcaggtcataaaagaggcatatgaccagaaagggccaagggttaccacaaatata
acattgccgggtaggtatttggttcttttgccaaatacagagtatgtgggtgtttcaaag
agaattgagagtgaggaggaaagactgagactcaaagagatagcatgcagattaaaacca
gagggaatgggtctgattgtcagaactgcagcagaaggtaaaagcgaagagattttaaaa
agtgagcttgagtttttaaagaatatgtggaaaaaaataagacagaaaagctgccagagc
gcacctgtgcttctttacaaagactatgacctagtgttcaaagctgtcagagacatgttc
accaaccaggttgacaggtttgtgataaatgataggaaaaaatataacaagataatagag
tttttgtcttcttatgctccaagcttgaaaagtaaagttgagtattttaaccttgcaaca
aatatttttgaatattttcagatagagcaaaagcttgcaaaagctctctctaaaagagtg
tggctaaaaagtggtgggtatatagtaatagatgagacagaggcgttgacagtcattgac
gtcaacacaggaaagtatgttggcaaaactgatgttgcagagacaattttaaagacaaac
cttgaagctgcacaggagattgcaaggcagctgaggcttagagatattggtggaataatt
ataatcgactttatcgacatgaaaaatccagagcatcagaagatagttttagacgctttg
aaagaagctcttaagagagacaagacaaaaacagtggttgttgacataacgcctcttggg
cttgttgagatgacaaggaaaaaggtaagacaaagactttcttgtgtgatgcagtcaagc
tgtccttactgtgagggcacaggcaagattttatctccggaaagtgttgcgtttaaagtg
ctgaaagagattgagtggtattgcaaaaacaaggtggaagataagttctttgttgagatg
aacacaaaagtatgtgagattttgagaaagggtgaaattgacaggataaaagagcttgag
cagaagtacaaaaagaaaatctatgttaaagcttcttcaaatattcacataaataagttt
accatatgtcctgtcaaggatgaggatcactacatggcattgtgtggttggctttgcgag
ggggatgaggttttagcgtttgttgaggaggaagacaggttcaatccgaaaaatgcaatc
ggatatgtaaaccagaataaaatagagtttgataatgcttctgaccttattggcaaatat
atctatgcaaaggttgaaaaggtgtatggaacactttcaaaaggaaagattttggatgta
tatgaggttgataaagaggatgtgaaagaattctaa
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