Caldicellulosiruptor owensensis: Calow_1924
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Entry
Calow_1924 CDS
T01347
Name
(GenBank) Endo-1,4-beta-xylanase
KO
K01181
endo-1,4-beta-xylanase [EC:
3.2.1.8
]
Organism
cow
Caldicellulosiruptor owensensis
Brite
Enzymes [BR:
cow01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.8 endo-1,4-beta-xylanase
Calow_1924
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_10
CBM_4_9
CBM9_1
SLH
Cadherin-like
Mann_GBD_bact
Med3
TFIIA
Motif
Other DBs
NCBI-ProteinID:
ADQ05453
UniProt:
E4Q5G9
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All DBs
Position
complement(2022545..2027572)
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AA seq
1675 aa
AA seq
DB search
MKRRLVAFLIVLVFVLSIVNPAYFSFLTPVAKAQTGGTNLRFDFENGTQGWGPRGVSTTI
ATVYEQAYEGSYSLKVSGRSSTWDGAVVDITSSISANVTYTVSLFVRHSDIKPQRFSVYA
RVIDGSSEKYIQIADKVVMPNFWKQLFGKFTIATANPVQKVELLVCVPSNKSLEFFLDNV
IVTSAQPASSGLVKSCTFESGGTEGWQARGTGSDAQVSVVDTVAHSGSKSLYVTGRAATW
QGAQIDMTSLLEKGKEYQFSIWVYQNSGSEQKITLTMLRKNEDNSTNYDTIKWQQTVASG
QWTEVTGSYTVPQTATQLIFYVESPNINFDFYLDDFTAVDKNPPVVNPGLVKSCTFESGS
TEGFVQRGSASLTVVDGVYYHSPTKALYVTGRTATWQGAQIDMTSLLEKGKEYQFSIWVY
QNSGSEQKITLTMQRKNEDNSTNYDTIKWQQTVASGQWTEVTGSYTVPQTATQLIFYVES
PNINFDFYLDDFTVIDKNPITVPTAAKEPEWEIPSLCQQYSQYFSIGVAIPYRVLQNPVE
RAMVLKHFNSITAENEMKPDALQRTEGNFTFDIADQYVNFAQQNGIGIRGHTLVWHSQVP
DWFFQHSDGTPLDPNNPDDKQLLRDRLKNHIQTVMSRYKGKVYAWDVVNEAIDESQPDGY
RRSEWYRILGPTPETNGIPEYIVLAFQYARQTDPDAKLFYNDYNTETPKKRQFIYNMVTK
LHEMGLIDGVGLQGHINVDSPTVKDIETTINLFSTIPGLEIQITELDISVYTGSSQRYDT
LPQDVMIKQAMKFKELFEMLKRHSDRVTNVTLWGLKDDYSWLSKDRNNWPLLFDSNYQAK
YNYWAIVEPSVLPLAINKASALNATATIDGIMDREYKGAIPVEIKDDAGNIKAVARMLWN
ANELYLYVNVNDSTYNPDTDFVMVCIDQDNAKLPELKPDDFWAIITRGGVLTELQNGKIA
AYKVVTQQDSYVVEAKIILDNQLVKGANIGFDLAVRDDANVYSWNDKTNSQLYTTDNYGI
LSMSDNIKFATVYKGTPKIDGNEDPIWEFATQIKTETPIQVSGTVYAAAYANVKLLWDET
AIYVWADVYDPLLNKANANPWEQDSIEIFVDENNHKTPYYEDDDVQYRVNYENTQTFGTN
GYAQNFVTSTKITPFGYTVEAKVYMRTTTLSEGTIIGFDVQVNDADHTGRRVNVITWNDR
SGNDWRDTTGFGCIELALFKNANLKQLAVSPGILSPGFSKDITAYTVTVPYETSSITVTA
VPEIPSSLIYINDVQGNTKVISLNVGVNIIRVKVVADDNSEKIYTITVTRNAQTTTSPTT
VIPSTPSTGTSTPTTTQEPQQTQQQQQQTQTQTQTQTTVQQQQQTQPATSQNTATIKLED
GKPTTVNLGQDTKVIVTPDAVTNTNAVISVEKVEKVSVNVGIGSIVAPAVKLNVENADLI
KPVKIEVKVDPVNFKDDKIPVAFVVDETNKLTLVPVKKDVNKVVINTNKEGTIVVVAAKL
DEVYKDITKNHWAYDTFKQAVTSGLVVGYNDMTLKPAKNVTLAEAAVIVQRAFEVQPKDT
DKLPDVPGWAATAIKALLDNEIFAEIDNTNKPITRIQAVSIIMKALEKAGVSVESDEVEF
SDISEQSLVDVEYLAKAYKLGIVKGYPDGTFKPNKEITRAEFLTLLFRALSNLKK
NT seq
5028 nt
NT seq
+upstream
nt +downstream
nt
atgaagagacgattggtagcctttctaattgtgctggtttttgtcctatcaatagtaaat
cctgcgtacttttcgtttttgacccctgttgctaaggctcaaacgggtggtactaattta
agatttgactttgaaaacggtactcaaggttggggtccaagaggtgtttcaacaactatt
gcaaccgtttacgagcaagcttatgaagggagttattctttaaaggtttcaggaagaagt
tctacatgggatggagcagttgttgatatcacatcaagtatttcagcaaatgttacctat
acggtttctttatttgtccgtcacagtgatataaaacctcagagattttcagtttatgct
cgtgtaatagatggtagcagtgaaaaatacattcaaattgcagacaaggttgttatgcca
aacttctggaagcagctctttggtaaatttacaattgcaacagcaaatccagttcaaaaa
gttgaacttcttgtgtgtgttccatctaacaaatctctggagttctttcttgacaatgtg
attgttacttcagcacagccagcttcatcagggttggtaaagtcctgtacatttgagagt
ggtggcacagaaggctggcaagcaagaggaacaggttcagatgctcaagtttctgtggtt
gatacagttgcgcattcaggtagcaaaagcttgtatgtgacaggaagggcagctacatgg
cagggtgcccagatagacatgacaagtttgcttgagaaaggcaaggagtatcagtttagc
atatgggtatatcaaaacagtggaagtgagcagaagataacccttacgatgctaaggaag
aatgaagataatagtacaaattatgacacgataaagtggcagcaaacagtagcatcaggg
cagtggacagaagtaacaggttcatacacagtgccgcagacagcaacacagcttatattc
tatgttgaatcaccgaatattaattttgacttctaccttgatgattttacagcagttgat
aaaaacccacctgttgtaaacccggggcttgttaagtcttgcacatttgaaagcggtagt
actgagggttttgttcagagaggttcagcttcattgacagttgtcgatggtgtatactat
cattctccaacaaaagcattgtatgtgacaggaaggacagccacatggcagggtgcccag
atagacatgacaagtttgcttgagaagggcaaggagtatcagtttagcatatgggtatat
caaaacagtggaagtgagcagaagataacccttacgatgcaaaggaagaatgaagataat
agtacaaattatgacacgataaagtggcagcaaacagtagcatcagggcagtggacagaa
gtaacaggttcatacacagtgccgcagacagcaacacagcttatattctatgttgaatca
ccgaatattaattttgacttctaccttgatgattttacagtaattgataaaaacccgatt
acagtcccgactgcagcaaaagagcctgaatgggaaattccgtcgctttgtcagcaatac
agtcagtatttctcaataggtgttgcaataccatatagagtacttcaaaatccggttgaa
agagcaatggtgttaaaacacttcaacagtataacagctgaaaatgagatgaaacctgac
gctctgcaaagaacagaagggaactttacattcgatatagcagaccagtatgtaaacttt
gcacagcaaaacggtattggaattagagggcatactcttgtatggcacagccaggtacct
gattggttcttccagcacagtgatggaactccacttgacccgaacaaccccgatgataag
caacttttgagagatagattgaaaaatcatattcaaactgttatgtcgagatacaaaggg
aaagtttatgcatgggatgttgtaaacgaggcaatagatgaaagccagcctgatggttat
agaagaagtgaatggtacagaatacttggtccaacacctgagacaaatggtataccagaa
tacattgtacttgcgttccagtatgcaagacaaacagacccggatgcaaaacttttctat
aacgactataatacagaaactcctaagaagcgacagttcatatacaacatggtaacaaaa
ctgcatgaaatgggtttaattgacggtgttggtttacaagggcatataaacgttgattct
ccaacagtgaaagatatagagactacaattaatctattctcgacaattcccggacttgaa
attcaaataacagagcttgatataagcgtttacacaggtagcagtcagcgttatgataca
cttccacaggatgtaatgataaaacaagcaatgaagtttaaagagttatttgagatgtta
aagagacacagcgacagagttacaaatgtaacactctggggacttaaagacgattattca
tggctttcaaaggatagaaataactggccattactttttgacagcaactaccaggcaaaa
tataactactgggcaattgtagagccatcagttttgccacttgctattaacaaagcaagt
gctttaaatgcaacagctacaatagatggaattatggacagagaatacaaaggtgctatt
cctgttgagattaaagatgatgcagggaatataaaagctgtagcaaggatgctctggaat
gctaacgaattgtacttgtatgtcaatgtaaatgattcaacttataacccggatactgac
tttgtaatggtatgtattgaccaggacaatgcaaaacttcctgaacttaaacctgatgat
ttctgggctattataacaagaggtggtgttttgacagagcttcaaaatgggaaaattgca
gcatataaagttgtaacacagcaggattcatatgttgttgaagcaaagataattcttgat
aatcaacttgttaagggtgctaatattggatttgatttggcagtaagagatgatgccaac
gtatatagctggaacgataagacaaattcgcagttatatacaacagacaattatggtatt
ttaagtatgtcagacaatataaaatttgcaacagtttataaaggaacacccaagattgat
gggaacgaagatcctatttgggagtttgcaacacagattaagacagaaacacctattcag
gtaagtggaactgtgtacgcagcggcttatgctaatgttaaacttctgtgggatgaaact
gcgatttacgtttgggcagatgtatatgatccgcttttgaacaaagctaatgcaaatcca
tgggagcaggattcaatagagatctttgtagacgaaaacaatcataagacaccatactat
gaagatgatgatgttcaatatagagtaaattatgagaatacccagacatttggaacaaat
ggttatgcgcaaaactttgtaacaagtacaaagataactccatttggttatacagttgaa
gcaaaagtttatatgaggacaacaaccctttctgagggtacaataataggctttgatgtt
caggtgaatgatgcagaccatacaggcagacgagtaaatgtcataacgtggaacgataga
agcgggaatgactggagagacactactggatttgggtgcattgaattggcactatttaag
aatgcaaatcttaaacagcttgctgtcagtccgggtattctgtcacctggatttagtaaa
gatataacagcgtatactgtaacagtaccttatgagacatcttcaattacggtgacagct
gtaccggaaattccatcatcattgatttacattaatgatgttcagggtaatacaaaagtt
atatcattgaacgttggtgttaatataataagagtaaaggtagttgcagatgataattct
gaaaagatttatacaataacagttacaagaaatgcacagacaacaacttcaccaacaaca
gtaattccatcaacaccgtctacaggtacctctacaccaactacaacacaagagcctcag
cagacacaacaacagcagcaacagacacaaacacagacacaaacacaaaccactgtgcaa
cagcaacaacaaacacaaccggcaacttctcaaaatacagccacaattaaacttgaagat
ggcaaaccaacaactgtaaatcttgggcaggacacaaaagttattgtaacgccagatgct
gtaacaaatacgaatgcggttatcagtgtagaaaaagtcgaaaaagtttcagtaaatgtt
ggaattggttcaatagttgctccggctgttaaactcaatgttgagaatgcagatttgata
aagcctgttaagattgaagtaaaagttgatccagttaactttaaagacgacaaaatacct
gtagcattcgttgtagatgagacaaataaattgacacttgttcctgtcaaaaaagatgta
aacaaagttgttataaatacaaacaaagagggaacaattgtagttgttgctgcgaagctt
gatgaggtttataaagatataacaaagaatcactgggcatatgacacatttaaacaggca
gtgacttctggtttagttgtaggttataatgacatgacattaaagcctgcaaagaatgta
acacttgctgaagcagcagttatagtccaacgggcatttgaagttcaaccaaaggataca
gataaacttcctgatgttcctggctgggcagcaactgctattaaagctttgcttgacaat
gagatttttgctgaaatagataatactaacaagccgattacgagaattcaagcagtatca
ataatcatgaaagcgctagaaaaagctggagtaagtgtagaatctgatgaagttgagttc
agtgatatttctgagcaatctttagttgatgttgaatatcttgcaaaggcatacaaactt
ggtattgttaaaggatatccagatggaacgttcaaaccaaataaagaaattactagagca
gaatttttgacattgcttttcagggcactgagcaatttaaagaaataa
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