Caldicellulosiruptor owensensis: Calow_2012
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Entry
Calow_2012 CDS
T01347
Name
(GenBank) transcriptional regulator, LacI family
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
cow
Caldicellulosiruptor owensensis
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cow03000
]
Calow_2012
Transcription factors [BR:
cow03000
]
Prokaryotic type
Helix-turn-helix
LacI family
Calow_2012
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Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
Peripla_BP_4
LacI
HTH_38
HTH_3
HTH_7
HTH_31
HTH_23
HTH_26
HTH_60
HTH_5
Motif
Other DBs
NCBI-ProteinID:
ADQ05529
UniProt:
E4Q5X0
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Position
complement(2120297..2121304)
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AA seq
335 aa
AA seq
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MKYTIKDIAKITGYSVATISRVLSGKEGVSEEKRKEILKIIEQLGYIPNQSARRLRSKET
KNILVMIPDIENYFYNKLIKGIETEVREKGYNIILGDFSDSQEIEEEYYRMMKGQIADGI
LIVGSMSQPQRIVEVSRQFPMVVISDYFSDELVTVCIDNFKAAYDATMFLYKCGYRRIAK
ITGKIGAVLSQDRLKGYRIALENLGLEFNERYIKYGDFKYESGYRLAKELLKIFPPPDAI
FCSNDEMAIGACDAAKELGFSIPEELGIMGFDDIELSSMVTPKITTVHQPRYEMGKLAAQ
LLINILAGEEVSKGKYILDTSIIPKESTKNANITK
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgaagtacacaataaaagacatagcaaagataactggctattctgttgcgacaatttca
agggtgctgagcggcaaagaaggagtaagcgaggaaaaaagaaaggaaatcttaaaaatt
atagagcagcttgggtatattccaaatcaaagtgcaagaagactcagaagcaaagaaact
aaaaatattctggtaatgatacctgatatagagaactacttttacaacaagctcataaaa
ggtattgagacagaggtgcgcgaaaaagggtataatataatccttggtgatttttcagat
tctcaagaaattgaagaagaatattatcggatgatgaaagggcagatagcagatggaatc
ttaattgttgggagtatgagccagccacagaggattgttgaagtatcaagacagttccct
atggttgtgatttctgactatttttctgacgagcttgtgactgtatgcatcgacaatttt
aaggcagcgtatgatgccacaatgtttttgtacaaatgtggatataggagaattgctaag
ataactggtaagataggagcagtattatcacaggacagattaaaaggttacaggatagct
cttgaaaatttgggattagagtttaacgaaagatacattaaatatggtgattttaagtat
gaaagcggctatagacttgcaaaggaacttttaaaaatatttccacctcctgatgctatc
ttttgttcgaacgatgaaatggcaattggcgcatgtgacgcagcaaaagaacttggtttt
tcgattcctgaggagctcggcattatgggatttgacgatattgaactttcttcaatggtg
acgcctaaaattaccacagttcatcagccgcgatatgaaatgggaaagttggctgcacaa
cttttgataaacattttagcaggagaagaagtttcaaaaggcaaatacatccttgacact
tcaataattccaaaagaatcaaccaaaaatgcaaatataacaaagtaa
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