Caldicellulosiruptor owensensis: Calow_2109
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Entry
Calow_2109 CDS
T01347
Name
(GenBank) Pectate disaccharide-lyase
KO
K22994
pectate disaccharide-lyase [EC:
4.2.2.9
]
Organism
cow
Caldicellulosiruptor owensensis
Pathway
cow00040
Pentose and glucuronate interconversions
cow01100
Metabolic pathways
cow01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
cow00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
Calow_2109
Enzymes [BR:
cow01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.9 pectate disaccharide-lyase
Calow_2109
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pel9A-like_beta_helix
Big_3
PelX_N
SLH
PelX_Ig
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
ADQ05619
UniProt:
E4Q6L2
LinkDB
All DBs
Position
complement(2236193..2241328)
Genome browser
AA seq
1711 aa
AA seq
DB search
MREAIQAINKINEERGVAKMKFYKLTKISLSFLLILSLILSQLSFVFAEGTSNILSDWEF
RAFGSNTSADKNPLPTFNSDGSITLKATGGKIASTDEGISFYFKTIASDASFEIRAKAAV
ISFNSNSSISTPNQKSFGIMLREKVGANGDSTTQTSNYILVGALDTVMKAVYKESGQQTK
ITLINTTPTTGMQYDLSIKKSGNTYVVSCNGTTQTFNLDNMFGDYIYAGLYVARDAEITF
SNFEIVEIREVKDLRVDTSSMKTEYIVGEDLDLSGLKVTAIYTDGTEETLSKNDYIVTGF
DNTKPGVCPVTIQYGNVSKIININILPLVCTGLEIKYLPIKTEYYIGDKFNPEGLVVIGK
YNNGKSLELTSDKYKFSISGIPIDDSYVFNSSGKKTIMIISVENPQISTSFDVNVKDAQI
IGLEIKRLPNKVNYFIGEELDLKGLIVYAKYSDNSEVKLMDGEYSYTPIDTTVAGNKEVT
ISYKGVSTKFMVTVKEKQLIGIEVTTYPKTTYYIGESFDPTGLVVSKVYDNGDKEILSEN
EYTIDISRFDSSTSGIYDIKIVPVNLSVNPIIFKVTVRERKEYEWKSIRFGQSTSDTKNF
VEIKDDGAIRIVALDGGGKVATDHDGITFYYTELDATKDNFVLSADIKVINYAKTPHDGQ
ESFGIMARDAIGTPGDSSVFASNMVAVGGFSGGTKKPNGTQLFMRIGVTSPDGTGSKGIQ
NIMLKEEKPTIDNTYPAKTYRLTLAKTNSGFIGKLFDGVEEKEAIFYEPDILSVQTPKMY
VGFFAARVAEIEVYNIDFRVTASETDPPRVMPPQSPTIPDFSILSLDKTSKQNYNLLVRS
NVDGFITIVKGSETIVQDRQVKANEIVNVQTKLNEGTTDFRIVFLPDNTQYLTSYDRIIK
NFTVTMKTYAPGGDIYVAPNGTSDGDGTIQNPLDLDTAIDFVREGQKIILLDGVYVRSTK
LEIKKYNDGAPNAMKYLVAAPGARPVIDFDKKGGGFVLSGNYWYIKGIDFARSAPNTQGA
VIGGSYNVIELCNFYENGDTGLQISRTDLSSSISDWPSYNLIINCTSYNNRDPSENNADG
FAAKLTSGVGNVFRGCIAHHNTDDGWDLYTKLGTGAIGPVTIEDCVAYENGYLTDGTVTK
GDGNGFKLGGEGIAVGHVVKSSIAFGNRGAGFTSNSNPAVQIYNCVSYNNVGSNIALYSY
TGIPLQFKVENFVSYRTVSGPKDSYPESVVSDSNYFWNGTESVNKKGIRLTESNFASLEK
PVQYSRDSNGNIIWGNFLKFIAPKISTVEIQPQIIPSTETILQNVEKSEIELQKETKETK
AEEITQTVAAEKQKETNFGKVVEQTNKATVIIDLNKISKEIAENTKKEIGFDVTGISLKP
VKEISIPMNVVKSAGEKDKIISIKSDDISIKFNSRNILTLKEIASAEDETNSIVFALENK
EQKVIDRLKPVSGIYNITVKTGKGKINSGFTVQLAFEVKNASDIRKVGIYYLNETSKKWE
YVGGKVDKKSNVVVVEINHLSTYGAFEYDKQFKDVPKDFWAYEPINILASKHIIKGRTEE
TFEPNLAVTRAEFIAMVARTLGIAEEDYKGEFEDVKKDAWYANIIEAAYKAGIVAGNGKK
IRPDEPIKREEMIMVVMRAYSKLTGFEKEHFSLSYSDASQISTWAREAIENAARLGIVTG
YNDNTFKPQKNSTRSEAAAILYRILEKAGVF
NT seq
5136 nt
NT seq
+upstream
nt +downstream
nt
ttgcgtgaggctatacaggcaataaacaagataaatgaagaacggggggtagctaaaatg
aaattttataaattgacaaaaataagtttgagttttttacttattttaagcttaatttta
agccagctaagttttgtttttgctgaagggacaagcaatatcttaagtgattgggaattt
agagcatttggcagcaatacaagtgctgataaaaatcctctgcctacatttaattcagat
ggttcaattacattgaaagctactggtggaaaaatagcaagtacggatgaaggcatatct
ttttatttcaaaactattgcttcagatgcaagttttgaaataagagcaaaagcagctgtt
ataagttttaatagcaacagtagtatcagtacaccaaaccaaaaatcttttggaattatg
ctcagagaaaaggttggagcaaatggagattcgacaactcaaacgtcaaattacatttta
gttggtgctcttgacactgttatgaaggctgtatataaggaaagtggacagcaaaccaaa
ataacactaataaacacaactccgacaactggtatgcaatatgacctcagtataaaaaaa
tcaggcaatacatatgttgtttcgtgtaatggtacaacccagacatttaatcttgataac
atgtttggtgactacatttatgcaggtttatatgtggcaagagatgccgaaataactttt
agtaattttgaaattgtagaaattagggaagtgaaagatctcagagttgatacaagttca
atgaaaactgagtatattgttggcgaagatttggatttaagtggactcaaagttacagca
atttatacagatggcacagaagaaactctgtcaaagaatgattatattgtaacgggtttt
gataatacaaaaccaggagtatgtcccgttacaattcaatatggtaacgtttcaaaaatt
attaacataaatattcttcctctagtatgtacaggacttgaaataaaatatctgccaata
aaaacagaatattatattggcgataaattcaatcctgaaggacttgtggttataggaaaa
tataacaatggcaaatccttagagttgacatcggataagtataaattttcgatatcaggt
attccaattgatgatagctatgtatttaactcttctggtaagaagactattatgataatt
tcagttgaaaatccacaaatcagcacaagtttcgatgtaaatgttaaagatgctcaaatt
ataggcttggaaataaaacgtctaccgaataaagtaaactattttattggggaagaatta
gatttaaagggacttattgtttatgcaaaatatagcgataattcagaggtaaaattaatg
gatggggaatattcatatactccgattgacactactgttgctggtaacaaagaggttaca
atttcatacaaaggtgtgtcaacaaaatttatggttaccgtaaaagaaaaacaactcatt
ggaatcgaagttactacgtatccaaaaaccacttattatataggtgaatcatttgatcca
acaggattagtagtgtctaaagtttatgataatggagataaagaaatcttatcggaaaac
gaatataccattgatatttcaagatttgatagttcaacgtcgggaatatatgatataaaa
attgtccctgttaatttaagcgtaaacccgataattttcaaagttactgtaagagagaga
aaagaatatgagtggaaatcaattagatttgggcaatctacctcagataccaagaacttt
gttgaaattaaggatgatggagcaattagaattgtagctttagatggtggtggaaaggta
gcaactgaccatgatggtataacattttattacacagaattagatgcaacaaaagataat
tttgttctctcagcagatataaaggtaataaactatgcaaaaacaccgcacgatggtcaa
gaatcttttggtattatggcaagggatgcaataggaacgccgggtgattcaagtgttttt
gcatcaaacatggtagccgttggcggctttagtggaggtactaaaaaacctaatggaact
cagctttttatgagaataggagttacatcacctgatggaacaggtagtaaaggtatccag
aacataatgttaaaagaagaaaaacctactattgataacacttatcctgcaaaaacttat
aggctcacgttggcaaaaactaatagtggttttattggaaagctttttgatggggtagaa
gagaaagaagctatcttttatgaaccagacattctaagcgttcaaaccccaaagatgtat
gtgggattttttgcagcacgtgttgcagaaatcgaggtttacaacatagattttagagta
actgcttcagaaactgatccaccaagagttatgccgccacaaagtccaactataccagat
tttagtatactatctttggacaaaacctcaaaacaaaattataacttgcttgtaaggagc
aatgttgatggatttataactattgtgaaaggttctgaaaccatcgttcaggacagacaa
gttaaagctaacgaaatagtaaatgttcaaacaaaactaaatgaagggactacagatttt
agaattgtatttctacctgataatactcaatatttaacttcatatgataggattattaaa
aacttcacagttaccatgaagacctatgcaccaggtggagatatatatgtggcacctaat
ggaacaagtgatggtgatgggactatacaaaatcctttggacttagacactgctattgat
tttgtaagagaaggacaaaaaattattttgcttgacggggtatatgtccgcagcactaag
ctggaaatcaaaaaatataacgatggagcgccaaacgctatgaaataccttgttgctgct
cctggggcaagacctgttattgattttgataaaaaaggaggaggttttgttcttagcggc
aattactggtatataaaaggtatcgattttgcacgctctgctccgaacactcaaggagct
gtaattggaggtagctataacgtaattgaactgtgcaatttttatgaaaatggagacact
ggtcttcagataagcaggacagatttatcttcaagtatttcagattggccgtcttataac
ttaataataaattgtacttcatataataatcgcgacccttcagaaaacaatgcggatgga
tttgcagcaaaacttacatcaggagtaggaaatgtttttagaggttgcattgcacatcat
aataccgatgatggatgggatttgtatactaaattaggaacaggagctataggaccagtt
acaatagaagactgcgttgcatacgaaaatggatatttaactgatggaacagttacaaaa
ggtgacggaaatggatttaaactgggcggtgagggtatcgcagttggacatgtcgtaaaa
agttctattgcttttggtaacagaggagcgggatttactagcaacagcaatcctgcagtg
caaatttacaactgcgtttcttataacaatgtgggttctaacatagcactatattcttat
acaggaatacctcttcagtttaaagttgagaattttgtttcatatagaacagtttcagga
cctaaagactcttacccggaaagcgttgtgagtgatagtaactatttttggaacggtaca
gagtcggtcaataaaaaggggattagacttacagaatctaactttgcaagtttagaaaaa
ccagttcaatatagtagggattcaaatggaaatattatctggggcaacttcttgaaattt
attgctcctaaaatatctacagttgaaattcaaccacagattattccatctacagaaact
atattgcaaaatgtagagaaatctgaaatagaattacagaaagaaacaaaagaaacaaaa
gcagaagaaattactcaaactgtagctgcagaaaaacaaaaggagaccaatttcggaaaa
gttgttgaacaaacgaacaaagccactgtaatcattgatctaaataaaatatcaaaagag
attgcagaaaatacaaagaaagagattggctttgacgtcactggtatctctttaaagcct
gttaaagaaatttcaatacctatgaatgttgtaaaatccgcaggtgaaaaagataagata
atttcaataaaatctgatgatatcagcattaagtttaattcaagaaatattctgacattg
aaagaaattgcaagtgcagaagacgaaactaattcgatagtgtttgcattggaaaataaa
gaacaaaaagtaattgataggttaaaacctgtttcgggtatctacaatataactgtgaaa
acaggcaaaggaaaaataaattctggttttactgttcaattagcctttgaagtgaaaaat
gcaagtgatattcgaaaagtaggaatatattatttaaatgaaacaagcaaaaaatgggaa
tatgttggtggaaaagttgataagaagtcaaatgttgttgtagtagaaataaatcatctt
tccacctatggagcatttgaatatgataaacagtttaaagatgttccaaaggatttttgg
gcttatgaaccaataaatattcttgcatcaaagcatataatcaagggcagaactgaggaa
acatttgaaccaaacttggcagtaacaagggctgagttcattgcaatggttgcacgaact
ttgggcatagctgaagaagactacaaaggagaattcgaagatgtaaagaaagacgcctgg
tatgcaaatattatagaagcagcatataaagctgggattgttgcaggaaatggcaaaaaa
attagaccagatgaaccaatcaaaagagaagaaatgattatggttgttatgagagcatat
agcaaattaacagggtttgaaaaagaacatttttcattaagttattctgatgcaagccag
attagcacatgggcaagggaagctatagaaaatgctgcaagactgggtattgttacagga
tataatgataatacatttaaaccccaaaagaattcaacaaggtcggaggcagcagcaatt
ctttatcgaatcttagaaaaagcaggagttttttaa
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