KEGG   Cupriavidus oxalaticus: E0W60_03025
Entry
E0W60_03025       CDS       T06004                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
cox  Cupriavidus oxalaticus
Brite
KEGG Orthology (KO) [BR:cox00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:cox03400]
    E0W60_03025
Enzymes [BR:cox01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     E0W60_03025
    5.6.2.6  RNA 3'-5' helicase
     E0W60_03025
DNA repair and recombination proteins [BR:cox03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    E0W60_03025
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: QBY51612
UniProt: A0A4V1BYF2
LinkDB
Position
1:704741..707356
AA seq 871 aa
MQALFDARGWQPFAFQREVWTAIARGQSGLLHATTGTGKTYAAWLGALMAFGTPRAALSH
DKPAPPLTVLWLTPMRALAADTTRALQAPLAELDLDWTVALRTGDTGSAERAAQQRRLPT
ALVTTPESLTLMLTRADAHETLRRVRMVVVDEWHELIGNKRGVQAQLALARLRQWQPALM
VWGLSATLGNLPHAADVLLCGVPEDLRVLVHGHTPKPLVIDTLLPGNASRFPFAGHLGLS
MLPHVVEELGHSGTTLVFLNTRSQAELWYQALLDARPDWAGQIALHHGSLDRAVREWVEL
SLKNGELRAVVCTSSLDLGVDFLPVERVLQVGSPKGVARLLQRAGRSGHAPGRASRVTVV
PTHSLELVEAVAARHAVQAGRIEARESPDKPLDVLVQHLVTVALGGGFRPEALLAEVRGA
WAYRGLTDAEWQWCLDFVRQGGATLSAYPDFRRAVPDDEGVWRVPDLGLARRHRMSVGTI
VSDATMQVRYWSRAGSGGASLGSVEEGFIARLAPGDCFLFGGRLLELVRVQEMTAYVRRA
TGRRPVVPRWNGGKMPMSTELAEAVIDTLEAAAAGRLDPRTTPELPLIQPLVDLQAQWSA
LPTRQTLLAESLHSREAWHLFLYPFAGRSVHLGLGSLLAWRLGQKVPATFSVAVNDYGLE
LLASAPMDWGHWLPQVLAEERRRDLAADVLGSLNAGELSLRRFREIARVAGLIFQGYPGA
PKSARQLQASSSLFYEVFRKHDPGNLLLGQAEREVLMQELDAHRLAETLERLATLRLDLH
ALKRPTPLSFPLVVEFLREKLSTEKLADRIARMLAELELAAGAEPGEAAGMQADAVAEAA
RFGMADHAGPSGRTPRKPRRARKPSRPLPLL
NT seq 2616 nt   +upstreamnt  +downstreamnt
ctgcaggcactgttcgatgcgcgcggctggcagccgttcgcgttccagcgcgaagtctgg
accgcgatcgcgcgcggccagagcggcctgctgcacgccaccaccggcaccggcaagacc
tatgcggcatggctgggcgcgctgatggcattcggcacgccgcgcgccgcgctgtcgcac
gacaagcccgcgccgccgctgacggtgctgtggctgacaccgatgcgcgcgctcgccgcc
gacaccacgcgcgcgctgcaggcgccgctggcggaactcgatctcgactggaccgtggcg
ctgcgcaccggcgacaccggcagcgccgagcgtgccgcgcagcaacgccgcctgccgacc
gcgctggtgaccacgcccgaaagcctgacgctgatgctgacccgcgccgacgcgcacgaa
accctgcggcgcgtgcgcatggtggtggtcgacgaatggcacgaactgatcggcaacaag
cgcggcgtgcaggcgcagctggcgcttgcgcggctgcggcaatggcagccggcgctgatg
gtgtgggggctgtcggccacgctcggcaacctgccgcatgccgccgacgtgctgctgtgc
ggcgtgccggaagacctgcgcgtgctggtgcacggccacacccccaagcccctcgtcatc
gacacgctgctgcccggcaatgccagccgcttcccgtttgccggccacctgggcctgtcg
atgctgccgcacgtggtcgaggagctcgggcacagcggcaccacgctggtcttcctcaac
acccgctcgcaggccgagctgtggtaccaggcgctgctcgatgcgcgccccgactgggca
ggacagatcgcgctgcaccatggctcgctcgaccgcgcggtgcgcgagtgggtggaactg
agccttaagaacggcgagctgcgcgcggtggtctgcacatcgagcctggacctcggcgtc
gacttcctgccggtggagcgcgtgctgcaggtcggctcgcccaagggcgtggcgcggctg
ctgcagcgcgccgggcgctccggccacgcgccgggccgcgcgtcgcgcgtgacggtggtg
cccacgcacagcctggaactggtggaagccgtggccgcgcggcatgcggtgcaggcgggc
cggatcgaggcgcgcgagtcgcccgacaagccgctcgacgtgctggtgcagcacctggtg
acggtggcgctgggcggcggcttccggcccgaggcgctgctggccgaggtgcgcggcgcc
tgggcctaccgcggcctgaccgatgccgaatggcagtggtgcctggacttcgtgcgccag
ggcggcgccacgctgtccgcctatcccgatttccgccgcgcggtgcccgacgatgaaggc
gtctggcgcgtgcccgacctcgggctggcgcggcgccaccgcatgagcgtgggcaccatc
gtcagcgacgccaccatgcaggtgcgctactggagccgcgccggcagcggcggcgcctcg
ctgggatcggtggaggaaggctttatcgcccggctggcgccaggcgactgcttcctgttc
ggcggccgcctgctggagctggtgcgcgtgcaggagatgaccgcctacgtgcgccgcgcc
accggcaggcgcccggtggtgccgcgctggaacggcggcaagatgccgatgtcgaccgag
ctggccgaagcggtgatcgacacgctcgaagccgccgccgcggggcggctcgatccgcgc
accacgcccgagctgccgctgatccagccgctggtagacctgcaggcgcagtggtcggcg
ctgcccacgcgccagacgctgctggccgagtcgctgcactcgcgcgaggcctggcacctg
ttcctctaccccttcgccggccgctcggtgcacctcgggctgggcagcctgctggcatgg
cggctcgggcagaaggtgccggcgacgttctcggtcgcggtcaacgactacgggctcgaa
ttgctcgcctcagcgccgatggactggggccactggctgccgcaggtgctggccgaggag
cgccggcgcgacctggccgccgacgtgctcggcagcctcaatgcgggcgagctgtcgctg
cggcgctttcgcgagatcgcgcgcgtcgccgggctgatcttccagggctatccgggcgcg
cccaagagcgcgcggcagctgcaggcgtcgtcgagcctgttctacgaggtcttccgcaag
cacgatcccggcaacctgctgcttggccaggccgagcgcgaagtgctgatgcaggaactg
gacgcacaccggctcgctgaaaccctcgaacggctggcaacgctcaggctagacctgcac
gccctgaagcgccccacgccgctgtcgttcccgctggtggtggaattcctgcgcgagaag
ctcagcaccgagaagctggccgaccgcatcgcgcgcatgctcgccgagctggaactggcc
gctggcgccgagcccggcgaagccgccggcatgcaggccgacgccgtggcagaagcggcg
cgcttcggcatggccgaccacgccggtccgtccggccgcacgccgcgcaagccccgtcgc
gcgcgcaagccctccagacccttgccgctgctatga

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