Cupriavidus oxalaticus: E0W60_05265
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Entry
E0W60_05265 CDS
T06004
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
cox
Cupriavidus oxalaticus
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cox03032
]
E0W60_05265
03400 DNA repair and recombination proteins [BR:
cox03400
]
E0W60_05265
Enzymes [BR:
cox01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
E0W60_05265
DNA replication proteins [BR:
cox03032
]
Prokaryotic type
DNA Topoisomerases
E0W60_05265
DNA repair and recombination proteins [BR:
cox03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
E0W60_05265
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Ribosomal_L40e
Motif
Other DBs
NCBI-ProteinID:
QBY50598
UniProt:
A0A4P7L507
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All DBs
Position
1:complement(1194243..1195301)
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AA seq
352 aa
AA seq
DB search
MDSILTATEPAATLDAVLRDAGLRYVDDSSPGITRCRQGSGFSYIDPDGERVRDATTLAR
IAALAIPPAYESVWICPDARGHLQATGRDARGRKQYVYHPEWAALRDSDKYARLPAFGAV
LPRLRARAARDLGRNGMPREKVVAAVVVLLDATLVRVGSPRYAQQNRTYGLTTLRRRHVT
VRGSRLRFQFTGKSGITHDVSVNDPRLARVVRNCADLPGQRLFKYRDSDGEIREIGSADV
NAYLKEATGGEFTAKDFRTWAGSVHALAILRKLPEAASETARKKAVADAIREVARQLRNT
MAVCRKCYVHPGVIEAYLCGVLEAGGKAPTVARLRADEARLLHLLQAVRRDD
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atggacagcatcctcaccgccaccgagcccgccgcgacgcttgacgccgtgctgcgcgat
gccggcctgcgctatgtcgacgacagcagccctggcattacccggtgccgccagggcagc
ggcttcagctatatcgatcccgatggcgaacgcgtgcgcgacgcaaccacgctggcccgc
attgccgcgctggccatccctccggcgtacgagtcggtgtggatctgcccggatgcgcgc
ggccacctgcaggccacggggcgagacgcgcgcgggcgcaagcagtacgtctaccacccc
gaatgggcggcactgcgcgattcagacaagtacgcgcgcctgccagccttcggcgcggtg
ctgccacggctgcgcgcccgtgccgcgcgcgacctgggccgcaacggcatgccgcgtgaa
aaggtcgtggcggcggtggtggtgctgctcgatgccacgctggtgcgggtgggctcgccg
cgctacgcgcagcagaaccgcacttatggcctgaccacgctgcggcgccggcatgtgacc
gtgcgcggcagccggctgcgcttccagttcaccggcaagagcggcatcacccacgacgtc
tcggtcaacgacccgcgcctggcgcgcgtcgtgcgcaactgcgccgacctgccgggccag
cggctgttcaagtaccgcgacagcgacggcgagatccgcgagatcggctcggccgacgtg
aatgcctacctgaaggaggcgacgggcggcgaattcaccgccaaggatttccgcacctgg
gccggcagcgtgcatgcgctggcaatcctgcgcaagctgccggaagccgccagcgaaacc
gcgcgcaagaaggccgtggccgacgcgatccgggaggtggcgcgacagctgcgcaatacc
atggcggtttgccgcaagtgctatgtgcatcccggcgtcatcgaggcttacctgtgcggt
gtgctcgaagccggcggaaaggcgccgacggtggccaggctgcgcgctgacgaagcccgc
ttgctgcatttgctgcaagcggtgcggcgcgatgactga
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