Cupriavidus oxalaticus: E0W60_05905
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Entry
E0W60_05905 CDS
T06004
Name
(GenBank) DNA-3-methyladenine glycosylase 2 family protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
cox
Cupriavidus oxalaticus
Pathway
cox03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
E0W60_05905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cox03000
]
E0W60_05905
03400 DNA repair and recombination proteins [BR:
cox03400
]
E0W60_05905
Enzymes [BR:
cox01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
E0W60_05905
Transcription factors [BR:
cox03000
]
Prokaryotic type
Helix-turn-helix
AraC family
E0W60_05905
DNA repair and recombination proteins [BR:
cox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
E0W60_05905
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
QBY50711
LinkDB
All DBs
Position
1:complement(1320713..1322197)
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AA seq
494 aa
AA seq
DB search
MNLDPDTCYKAVASHDRRFDGRFFVGVSSTGVYCRPVCAVRTPKRENCTFYESAAAAEKH
GFRPCLRCRPELAPGHGLADISGRLAQAAATLIDEGFMAEGSVTTLAARIGVTERHLRRL
FDAQFGVSVLEYAQTQRLLLAKRLLADTALPVTEVALAAGFGSVRRFNDVLKTRYGLTPL
ALRRRAADGVADRLVFELGYRPPLAWEALLGFLAARAVDGIEEIRDGAYARTLRVEAGGT
VHDGWVRIEHVPRRMVLRVTLSASLARAIPQALGKVRRLCDLGCRPDVVDRHLGELAQAV
PGMRLPGSVDGFEIAVRAVVGQVISVAHARRILAALAQRADSAATLPDALPGSLRYLFPS
AAAIAAMPPQDLRDAGVPAGKAHTLQALAQRVADGTLALDAHAPPEATVAALRAIDGIGD
WTAQYVAMRALGWPDAFPGTDYALRKVLGVGTVSAMHARTAQWAPWRAYAAVHLWHRYET
MKDAPAASEPETMT
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgatcccgacacctgctacaaggccgtggcatcgcatgaccgccgcttcgac
gggcgcttcttcgtaggcgtctcctcgaccggtgtgtactgccggccggtgtgcgcagta
cgcacccccaagcgcgagaactgcaccttctacgaaagtgccgccgccgccgagaagcac
ggcttccggccctgcctgcgctgccgcccggaactggcgcccgggcacgggcttgccgat
atctcgggccggctcgcgcaggccgccgccacgctgatcgacgaaggcttcatggccgaa
ggcagcgtcaccacgctggccgcgcgcatcggcgtgaccgagcggcatttgcggcgcctg
ttcgatgcgcagttcggtgtctcggtgctcgagtacgcgcagacccagcggctgctgctg
gccaagcgcctgctggccgacaccgcgctgccggtgaccgaggtggcgctggcggccggc
ttcggcagcgtgcgccgcttcaacgatgtgctgaagacgcgctacggcctgaccccgctc
gcgctgcgccggcgcgctgccgacggcgtggccgaccggctcgtgttcgagcttggctac
cggccgccgctggcgtgggaggcgctgctgggcttcctggccgcgcgcgcggtggatggc
atcgaagagatccgcgacggcgcctatgcgcgcacgctgcgcgtggaagcgggcggcacc
gtgcatgacggctgggtccgcattgagcatgtgccgcgccgcatggtgttgcgcgtgacc
ttgtcggcgtcgctggcgcgcgcgatcccgcaggcgctgggcaaggtgcggcgcctgtgc
gacctgggctgccgccccgatgtggtcgaccgccatctcggcgaactcgcgcaggccgtg
ccgggcatgcggttgccgggcagcgtcgacgggtttgagattgccgtgcgtgcggtggtg
ggtcaggtcatttcggtggcgcacgcgcgccgcatcctggccgcactggcgcagcgcgcg
gattcggcggcaacgctgcccgatgccctgccgggcagtctgcgctacctgttcccgagc
gccgccgccatcgccgccatgccgccgcaggacctgcgcgacgccggcgtgccggcgggc
aaggcgcacacgttgcaggcgctggcgcagcgcgtggccgacggcacactcgcgcttgac
gcgcacgcgccgcccgaagcgaccgtcgcggcgctgcgcgccatcgacggcatcggcgac
tggaccgcgcagtacgtcgccatgcgcgcgctgggctggcccgatgccttccctggcacc
gactatgcgctgcgcaaggtgctgggcgtcggcaccgtcagtgcaatgcacgcgcgcact
gcgcaatgggcgccgtggcgcgcctatgcggcggtccacctgtggcatcgctatgagacc
atgaaggacgcgcccgccgcgtccgaaccggagaccatgacatga
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