Cupriavidus oxalaticus: E0W60_14640
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Entry
E0W60_14640 CDS
T06004
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cox
Cupriavidus oxalaticus
Pathway
cox03030
DNA replication
cox03430
Mismatch repair
cox03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
E0W60_14640
03430 Mismatch repair
E0W60_14640
03440 Homologous recombination
E0W60_14640
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cox03032
]
E0W60_14640
03400 DNA repair and recombination proteins [BR:
cox03400
]
E0W60_14640
Enzymes [BR:
cox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
E0W60_14640
DNA replication proteins [BR:
cox03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
E0W60_14640
DNA repair and recombination proteins [BR:
cox03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
E0W60_14640
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
Motif
Other DBs
NCBI-ProteinID:
QBY52439
UniProt:
A0A4P7LE33
LinkDB
All DBs
Position
2:830647..834162
Genome browser
AA seq
1171 aa
AA seq
DB search
MSAPRFVHLRLHSEYSVVDGIVRLDDAVKAAAADGMGALALTDLANAFGLIRYYKEARGK
GVKPVVGADVWLTNAEDRDKPARLLLLVQDRRGYLNLCMLLSRAWLGNQHRGRAEIDPSW
FLEPGEDDMPLATGLIALSGAMGGDIGMALANGNADGARRAAQHWASVFAQRFYIELQRA
GHAGTDAYVQQAVQLAAELQLPVVATHPVQFMTPDDYTAHEARVCIAEGELLANPRRTRR
FTTDQYFKTQDEMCALFADIPSALENAVEIARRCNLTLELGKPRLPLFPTPDGMSLDDYL
VFMAKDGLEKRMAVLFPDEAVREAKRPEYYARLEFETGTIIKMGFPGYFLIVADFINWAK
NNGVPVGPGRGSGAGSLVAYALGITDLDPLKYALLFERFLNPERVSMPDFDIDFCQHGRD
RVITYVKEKYGKDAVSQIATFGTMAAKAAVRDVGRVLDLGYGFVDGIAKLIPFKPGKLVT
IEEAKKEEPLLTERENNEEEVRQLLELAQRVEGMTRNVGMHAGGVLIAPGRLTDFCPLYT
QGAQNDGMSGVVSQYDKDDVEAAGLVKFDFLGLTTLTILDWAERYIRRLDPSKADWNCSQ
IPLDDGPAFDILKTANTVAVFQLESRGMQGMLKDAKPDRFEDIIALVALYRPGPMDLIPS
FCARKHGREKVEYPDPRVEPVLKETYGIMVYQEQVMQMAQIIGGYSLGGADLLRRAMGKK
KPEEMAQHRVMFREGADKNGLNAQQADDIFDLMEKFAGYGFNKSHAAAYALLAYYTAWLK
AHHPAEFMAANMSLAMDDTDKVKILYEDCKLNKIAVLPPDVNASEYRFAPTDPKTIRYGL
GGIKGSGQGAIEDILRAREEGGAFKDLFDFCERVDRRQVNRRTMEALIRAGAFDSLNDNR
AQLLASVPIAMEAAEQKAESANQVSLFDLMGDAGEAHRPELLDEPRWSPKRTLQEEKQAL
GYYFSGHLFDAYRDEVRRFNKGTLASLEKEVQGNGGGFGRDVRGKTIAGVISGIRTQMTQ
RGKMLIVTLDDGTGLVEMTVFNEVFDANRQMFREDELLIATGNARHDTFTGGVRFTAESV
MDLTAARIRFATAVRLAMNGNSSTGLLRELLMPHLARATGAQGLPVRIGYQARTASCEAV
LGPEWQVVPSDEALGALRQALSAESVNTVYE
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atgtccgcaccccgcttcgtccacctccgcctgcattccgaatactccgtcgtggacggc
atcgtccgcctcgacgacgccgtcaaggccgccgccgccgatggcatgggcgcgctcgcc
ctgacggatcttgccaacgccttcgggctgatccgctattacaaggaagcgcgcggcaag
ggcgtgaagccggtggtcggggccgatgtctggctgaccaatgccgaagaccgcgacaag
cccgcacgcctgctgctgctagtgcaggaccggcgcggctatctgaacctgtgcatgctg
ctgtcgcgcgcgtggctgggcaaccagcaccgtggccgcgccgagatcgatccgtcgtgg
ttcctggagccgggcgaagacgacatgccgctcgccaccggcctgatcgcgctgtccggc
gcaatgggcggcgatatcggcatggcgctggccaacggcaatgccgacggcgcgcgccgt
gccgcgcagcactgggcatcggtgttcgcacagcgcttctatatcgaactgcagcgcgcc
ggccatgccggcaccgatgcctacgtgcagcaggccgtgcaactggcggccgaactgcag
ttgccggtggtcgccacgcatccggtgcagttcatgacgccggacgactacaccgcgcac
gaggcgcgcgtgtgtatcgccgagggcgagctgctggccaacccgcgccgcacgcggcgc
tttaccaccgaccagtacttcaagacccaggacgagatgtgcgcgctgttcgcggatatc
ccctcggcgctggagaacgcggtcgagatcgcgcgccgctgcaacctgacgctggaactg
ggcaagccgcgcctgccgctgttcccgacgccggacggcatgtcgctggacgactacctc
gtcttcatggccaaggacggcctcgagaagcgcatggcggtgctgtttccggacgaagcg
gtacgcgaagcgaagcgcccggaatattacgcacggctggagttcgagaccggcaccatc
atcaagatgggctttcccggctacttcctgatcgtggcggactttatcaactgggccaag
aacaacggcgtgccggtcgggcccggccggggttccggtgccggttcgctggtcgcgtat
gcgctgggcattaccgacctcgatccgctcaagtacgcgctgctgttcgagcgtttcctg
aacccggaacgggtatcgatgcccgacttcgatatcgacttctgccagcacggccgcgat
cgcgtgatcacgtacgtgaaggagaagtacggcaaggacgcggtgtcgcagatcgccacc
ttcggcaccatggccgccaaggccgcggtgcgcgacgtgggccgcgtgctcgacctgggc
tatggctttgtcgacggcatcgccaagctgatcccgttcaagccgggcaagctggtcacc
atcgaggaagcgaagaaagaagagccgctactgaccgagcgcgagaacaacgaggaagaa
gtgcgccagctgctggagctggcgcagcgcgtcgaaggcatgacgcgcaacgtcggcatg
cacgccggcggcgtgctgatcgcgcccggcaggctgaccgatttctgcccgctgtacacg
cagggcgcgcagaacgacggcatgagcggcgtcgtcagccagtacgacaaggacgacgtc
gaggccgccggcctggtcaagttcgacttcctgggcctgaccacgctcaccatcctggac
tgggccgagcgctatatccgccgcctcgacccgagcaaggccgactggaactgcagccag
atcccgctcgacgacggccccgccttcgacatcctcaagaccgccaacacggtcgccgtg
ttccagctggaaagccgcggcatgcagggcatgctgaaggacgccaagcctgaccgcttc
gaggacatcatcgcgctggtggcgctctaccgcccgggcccgatggacctgatccccagc
ttctgcgcgcgcaagcacggccgcgagaaggtggagtatcccgatccgcgcgtcgaaccc
gtcctgaaagagacctacggcatcatggtctaccaggagcaggtgatgcagatggcgcag
atcatcggcggctactcgcttggcggcgccgacctgctgcgccgcgcgatgggcaagaag
aagcccgaggagatggcgcagcatcgcgtcatgttccgcgagggggcggacaagaacggc
ctcaacgcgcagcaggccgacgacattttcgacctgatggagaagttcgcgggctacggc
ttcaacaagtcgcacgcggccgcgtatgcgctgctggcgtactacaccgcctggctcaag
gcccaccatccggccgaattcatggcagccaacatgtcgctggccatggacgacaccgac
aaggtcaagatcctctacgaggactgcaagctcaacaagatcgcggtgctgccgcctgac
gtcaacgccagcgagtaccgcttcgcgccgaccgaccccaagaccatccgctatggcctg
ggcggcatcaagggcagcgggcagggcgcgatcgaagacatcctgcgcgcgcgcgaagag
ggcggggcgttcaaggacctgttcgacttctgcgagcgcgtcgaccgccgccaggtcaac
cgccgcaccatggaagcgctgatccgcgccggcgccttcgacagcctgaacgacaaccgc
gcccagctgctggcctcggtgccgatcgccatggaagccgcggagcagaaggccgagtcc
gccaaccaggtgtcgctgttcgacctgatgggcgatgccggcgaagcgcaccgccccgaa
ctgctcgacgaaccgcgctggagccccaagcgcacgctgcaggaagaaaagcaggcgctc
ggctactacttctccggccacctgttcgacgcctatcgcgacgaggtgcgccgcttcaac
aagggcacgctggcctcgctggaaaaggaagtgcagggcaacggcggcggcttcggccgc
gacgtgcgcggcaagaccatcgccggcgtgatctccggcatccgcacccagatgacccag
cgcggcaagatgctgatcgtgacgctggacgacggcaccggcctggtcgagatgacggtg
ttcaacgaggtcttcgacgccaaccggcagatgttccgcgaggatgaactgctgatcgcc
accggcaatgcgcggcacgatacctttaccggcggcgtgcgctttaccgcggagtcggtg
atggacctgaccgcggcacggatccgctttgcgacggccgtgcggctggcgatgaacggc
aattcttcgaccgggttgctgcgcgaactgctgatgccgcacctggcacgcgccacgggt
gcccagggtctgccggtgcggatcggctaccaggcccggaccgcgtcgtgcgaagccgtg
ctggggccggagtggcaggtggtgccgtccgacgaggcgctgggcgcgctgcgccaggcg
ctgtcggcggagagcgtgaatacggtctacgaataa
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