Cupriavidus oxalaticus: E0W60_15445
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Entry
E0W60_15445 CDS
T06004
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cox
Cupriavidus oxalaticus
Pathway
cox03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cox00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
E0W60_15445 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cox03019
]
E0W60_15445 (pnp)
03016 Transfer RNA biogenesis [BR:
cox03016
]
E0W60_15445 (pnp)
Enzymes [BR:
cox01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
E0W60_15445 (pnp)
Messenger RNA biogenesis [BR:
cox03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
E0W60_15445 (pnp)
Transfer RNA biogenesis [BR:
cox03016
]
Prokaryotic type
tRNA degradation factors
E0W60_15445 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
KH_KhpA-B
KH-I_KHDC4-BBP
DUF5813
S1_RRP5
OB_RRP5_4th
Glyco_hydro_53
Motif
Other DBs
NCBI-ProteinID:
QBY52581
UniProt:
A0A4P7LKF1
LinkDB
All DBs
Position
2:1000117..1002291
Genome browser
AA seq
724 aa
AA seq
DB search
MSMFNKVVKEFQWGQHKVRMETGEIARQAGGAVLVDVEDTVVLATVVAAKNPKPGQDFFP
LTVDYIEKTYAAGKIPGGFFKREGRPSENETLTSRLIDRPLRPLFPEGFYNEVQVVVHVV
SLNPEVPADIPALIGASAALAVSGIPFSGPVGAARVGYKDGQYLLNPTRSQIATSDLDLV
VAGTERAVLMVESEANQLSEDVMLGAVVYGHEQMQTAINAIHELVREGGKPEWDWTAAAK
NEPLIAKVTEVALPLLQEAYQLRQKSARSQKLKEVTANVAAALAEAGVEADKVEVGNIMF
DLEAKIVRGQILNGEPRIDGRDTRTVRPIEIRSSVLPRAHGSALFTRGETQALVVATLGT
KSDEQIIDALAGEYRDRFMLHYNMPPFATGETGRVGSPKRREIGHGRLAKRALIPVLPKD
DEFAYTIRLVSEITESNGSSSMASVCGGCLALMDAGVPVKAHVAGVAMGLILEGNKFAVL
TDILGDEDHLGDMDFKVAGTDNGITALQMDIKVQGITKEIMQVALAQAKEGRLHILSNMQ
QAMGHARTELSEHAPRMITMKIHPDKIREVIGKGGSTIQALTKETGTTIDIQEDGTITIA
STSTEGMAEAKRRIEGITAEAEVGKIYNGTVLKLLDFGAIVNILPGKDGLLHISEIVNER
VKDIKDWLKEGQQVRVKLIQADEKGRLRLSLKAALAEEGGSISPINAGEGAAPAAPAGGS
EQQQ
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgtccatgttcaacaaggtcgtcaaggaattccagtggggccagcacaaggtccgcatg
gaaaccggcgaaatcgcccgccaggccggcggtgccgtgctggtcgatgtggaagacacc
gtggtgctggcgaccgtggtcgccgccaagaacccgaagccgggccaggatttcttcccg
ctgaccgtcgactacatcgagaagacctacgcggccggcaagatccccggcggcttcttc
aagcgtgaaggccgtccgtcggaaaacgagaccctgacctcgcgcctgatcgatcgtccg
ctgcgtccgctgttcccggaaggcttctacaacgaagtgcaggtggtggtgcacgtggtg
tcgctgaacccggaagtgccggccgacatccccgcgctgatcggcgcgtcggccgcgctg
gccgtgtcgggcatcccgttcagcggcccggtgggcgccgcgcgcgtgggctacaaggac
ggccagtacctgctgaacccgacccgctcgcagatcgccacctcggacctggacctggtg
gtcgccggcaccgagcgcgccgtgctgatggtcgaatcggaagccaaccagctttcggaa
gacgtgatgctgggcgccgtggtctatggccacgagcagatgcagaccgccatcaacgcc
atccatgaactggtgcgcgaaggcggcaagcccgagtgggactggaccgcggccgccaag
aacgagccgctgatcgccaaggtcaccgaagtcgcgctgccgctgctgcaggaggcctac
cagctgcgccagaagtcggcccgcagccagaagctgaaggaagtgacggccaacgtggcc
gccgcactggccgaagccggcgtggaagccgacaaggtggaagtcggcaacatcatgttc
gacctggaagccaagatcgtccgcggccagatcctgaacggcgagccgcgcatcgacggc
cgcgacacccgcaccgtgcgcccgatcgagatccgttcgtcggtgctgccgcgcgcgcac
ggctcggcgctgtttacccgcggcgagacgcaggcgctggtggtggccacgctgggcacc
aagagcgacgagcagatcatcgacgcgctggccggcgaataccgcgaccgcttcatgctc
cactacaacatgcccccgttcgccaccggtgaaaccggccgcgtgggcagcccgaagcgc
cgcgaaatcggccatggccgcctggccaagcgcgcactgatcccggtgctgccgaaggac
gatgagttcgcgtacaccatccgcctggtttcggaaatcaccgaatccaacggttcgtcg
tcgatggcttcggtctgcggcggctgcctggcgctgatggatgccggcgttccggtcaag
gcgcacgtggccggcgtggccatgggcctgatcctggaaggcaacaagttcgccgtgctg
accgatatcctgggcgatgaagatcacctgggcgacatggacttcaaggtggcgggtacc
gacaacggcatcaccgcgctgcagatggacatcaaggtccagggcatcaccaaggagatc
atgcaggtcgcgctggcgcaggccaaggaaggccgcctgcacatcctgtcgaacatgcag
caagccatgggccacgcccgcaccgagctgtcggagcacgcaccgcgcatgatcaccatg
aagatccatccggacaagatccgcgaagtgatcggcaagggcggctcgaccatccaggcg
ctgaccaaggaaaccggcaccaccatcgacatccaggaagacggcaccatcaccatcgcc
tcgacctcgaccgaaggcatggccgaagccaagcgccgcatcgagggcatcaccgcggaa
gccgaagtgggcaagatctacaacggcaccgtgctgaagctgctggacttcggcgccatc
gtcaacatcctgccgggcaaggatggcctgctgcacatctcggaaatcgtcaacgagcgt
gtgaaggacatcaaggactggctgaaggaaggccagcaggtccgcgtcaagctgatccag
gccgacgagaagggccgcctgcgcctgtcgctgaaggccgcgctggccgaagagggcggc
agcatcagcccgatcaacgctggcgaaggcgctgccccggcagcaccggccggcggctcg
gagcagcagcagtaa
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